Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0729 ATGGCACCAGCAGCAACAAATGAAGGAGAAGGGAAACCTATAAGATGTAAAGCGGCGGTTGCAAGAAGACCTGGTGAGCCACTGGTGATTGAAGAGATCATCGTGGCACCACCAATGCCGCGTGAGGTTCGGATCCGTGTTATATGTTCCTCTCTCTGCCACGTCGATCTCGCTTTTTCCAACATGCAGGACCCTCCTGGCTTTTACCCGAGAATTCTTGGTCATGAAGCAATTGGGGTTGTGGAAAGTGTAGGGAAGGATGTAACTGAAGTTACAAAAGGAGATACGGTTATTCCGATATTCCTACCAGATTGTGGGGAGTGTAGAGATTGCAAATCAACCAAGAGCAACCTTTGTACTAATTTCCCATTCAAAGTTTCTCCTTGGATGCTAAGAAATGAGAAAACCAGATTCACTGACCTAAACGGAGAGTTCATATATCATTTCATGTCTGTTTCAAGCTTCAGCGAGTACACTGTGGTTGACGTTGCCAATGTAACAAAGATTGACTCAGATATTCCTCCCGACAGGGCGTGCCTTCTCACTTGTGGTATAGGAGCTGGGGTAGGTGCTGCTTGGAAAACAGCAGGTGTGGAGCCAGGGTCTACAGTAGCTATTTTTGGACTAGGATCTATTGGATTAGCAGTTGCCGAGGGAGCCAGACTTTGTGGAGCAACTAAGATTATCGGTGTAGATGTCAACCCTGAAAAATTTGTAGTTGGAAAGAAGTTTGGGGTCACAGACTTTGTCCATGCTCGAGAATCTGAGAACAAACCTGTGAGCCAGGTTATCATAGAGATGACTGACGGGGGAGCAGATTATTGCTTTGAATGTGTCGGTATGGCGTCGTTGATGCATGAAGCATATGCTTCTTGTAGAAAGGGTTGGGGAAAAATAATTGTCTTAGGACTGGACAAACCTGAAGCAAGATTGAGCCTCAGTTGTAGTAAGGTCCTTCATGATGGGAAGACACTTCAGGGAAATTTATTTGGAGGACTCAAACCTAAGTCTCATGTATCCGTTCTACTCAAACGATACATGGACAAGGAACTGCAGTTGGATCAATTTATCACTCATGAAGTAGAGTTTAAGGACATCAATAAAGCTTTTGACTTGTTGAAAAATGGACAATGTATTCGATGTGTGATTTGGATGAACAAATGA 1164 0.4399 MAPAATNEGEGKPIRCKAAVARRPGEPLVIEEIIVAPPMPREVRIRVICSSLCHVDLAFSNMQDPPGFYPRILGHEAIGVVESVGKDVTEVTKGDTVIPIFLPDCGECRDCKSTKSNLCTNFPFKVSPWMLRNEKTRFTDLNGEFIYHFMSVSSFSEYTVVDVANVTKIDSDIPPDRACLLTCGIGAGVGAAWKTAGVEPGSTVAIFGLGSIGLAVAEGARLCGATKIIGVDVNPEKFVVGKKFGVTDFVHARESENKPVSQVIIEMTDGGADYCFECVGMASLMHEAYASCRKGWGKIIVLGLDKPEARLSLSCSKVLHDGKTLQGNLFGGLKPKSHVSVLLKRYMDKELQLDQFITHEVEFKDINKAFDLLKNGQCIRCVIWMNK* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0729 387 Pfam Alcohol dehydrogenase GroES-like domain 41 168 IPR013154 -
Tpr2g0729 387 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 74 88 IPR002328 GO:0008270|GO:0016491
Tpr2g0729 387 SUPERFAMILY GroES-like 10 190 IPR011032 -
Tpr2g0729 387 SUPERFAMILY GroES-like 337 384 IPR011032 -
Tpr2g0729 387 PANTHER ALCOHOL DEHYDROGENASE 9 384 - -
Tpr2g0729 387 Gene3D - 188 328 - -
Tpr2g0729 387 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 173 348 IPR036291 -
Tpr2g0729 387 Pfam Zinc-binding dehydrogenase 212 332 IPR013149 -
Tpr2g0729 387 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 9 384 - -
Tpr2g0729 387 Gene3D - 19 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0729 Tpr-Chr2 8469578 8473658 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0729 41 334 Monolignol Biosynthesis Gene Families AT4G37990 24.916 2.98e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0729 K00121 - gmx:100817521 647.121