Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0713 ATGGATGTTCATGTGATAAATGTTGAAGAAGAAAGTGATCATCAATCTGCAGATGACAGAGATACAGAACCTAGTGACGGTGAAATTAATAATGCTGAAAGTTCTGGATTTTATGTTGAGGAAGGGATTTCTGACCCATATTTGGGTATGGAATTTGATTCGGAGGATGCTGCCAAGGCTTTCTACTACGAGTACGCTAAACACGCGGGTTTCATCTCTAAAGTTGGCTCACGTAGTAGCTCTAAAGCCAACGGGCAAGATATGTATAGGGAGTTTGTGTGTGAAAGGGAAGGTTTGAACAAAAGGTTTAATGACGGTTGCAATGCTATGATTAAGATTGAGCTAAAGGGTCAAAATAAATGGGTTGTAACCAAATTTGTGAAGGAGCATAGTCATTCATTGATGAGTTCCAGCAAGTCACAAAAGCTGCATCCACGTAAGCATTTTTCCAGTGTCGGAAGGACTATGCCTGAAACTTATCAAGGAATTGGACTTGTTCCAAGTGGTGTCATGTATGTCTCTATGGATGGGAATCACGTTTCTAATCAGAATACTTCAGCGGTTCTGAATATTCATGCTTCCACTGCCGTTGATCCAAGTACCCCTGTTAAAAATGCCACATCGGTGAATTATACTGCTAGGCCACCTTCTCAAAACAGGACATTAGGGAAGGATGCCCATATTTTACTGGAGTATTTTAAGAAAATGCAGGGTGAGAACCCTGGTTTCTTCTATGCTATACAACTGGATGAAGACAATCATATGTCTAATGTCTTTTGGGCAGATGCCCGTTCCAGGACAGCTTACAGTCATTTTGGTGATGCAATTCATCTGGACACCACGTGTAGAGTTAACCAGTACAGCGTCCCATTTGCTCCTTTTACTGGAGTAAACAATCATGGTCAGTTGGTTTTGTTTGGTTGTGCACTCCTTTTTGATGACTCTGAGGCTTCTTTTTTGTGGCTCTTTAAGACATTTCTCTCAGCAATGAATGAACGACAACCTGTCTCCATAATTACTGATCAAGACATAGTCATACAGGAAGCAGTTTCACAAGTTTTCCCACAAGCTCGGCACTGTATTAACAAGTGGCATGTCTTGAGAGAAGGCCAGGAAAAGTTGGCCCATGTATGTCTAGCGCATCCAAATTTTCAGGGTGAACTTTATAATTGTATTAACCGGACAGAAACCATTGAGGAGTTTGAGTCATCTTGGAATTCTATCCTTGATAAATACAAACTTAGAAGAAATGATTGGCTTCAGTTGCTGTATAATGCCCGTGCTCAATGGGCTCCAGCTTACTTCCATGATTCATTTTTTGCTGCAATATCTCCTAATCAAGGATTTGGTGGTTCTTTTTTTGAAGGTTACATCAACCAACAGATGACATTGCCATTATTCTTTCGGCAGTATGAAAGAGCTTTAGAAAGCTGGATTGAAAAGGAAATAGAAGCAGACTTTGAGACAATTTGCACAACACCAGTTCTGAAGACTCCTTCACCAATGGAGAAACAGGCTGCTAACCTATATACAAGAAAAATATTTTTGAAGTTTCAGGATGAACTAGTTGAAACTTTTGTTTATACTGCAAATATAATTGAAGGAGATGATGTAAACAGTACATTCAAGGTTGCAAAATTTGAGGATGTCAACAAGGCATATACTGTTTCATTCAACCATGCAGAATTGAGAGCTAACTGTAGTTGCCAAATGTTTGAGTATTCAGGCATTCTTTGCAGGCACATTTTAACTGTTTTCACTATGACAAATGTTCTTACATTACCGTCTCATTACATCTTAAAAAGGTGGACAAAAAATGCAAAAAGTAGTGCTGGATCAGATGAATGTACTGGTGAATTACATGGACAGGAGTCCCTGACATTGAGGTACAGTAATCTATGTCGGGAAGCCATCAGATATGCTGAGGAAGGGGCAGTAACTGTGGAAACTTATAATGTTGCAGTGACTGGTCTTAAAGAAGGTGGAAAGAAGGTTACTGCAATGAAGAAAAGTGTTGCCAAAGCTACACCTCCTAACAGTCAAGCCAGTGGGACTAATAATAACAAGAAAACTACCACCAGTTCAACTTTGGATTCAACCCCTCTTTTGTGGCCCCGACAAGATGAAATAACAGGGAGGTTTAATCTCAATGATTCTGGTGGTCCGGTTCAATCAGTCGCTGACCTAAATTTGCCACGAATGACCCCAGTGTCTCTTCATCGAGATGGCGGTCCATCTGGAAACATGGTGGTTCTTCCATGCCTAAAAGCAATGACATGGGTAATGGAGAACAAAAACTCAAGTCTGGGGAGTAAAGTAGCTGTTATCAATCTGAAGCTGCAAGATAATAGTAGGAATCCATCAACAGAATTTGAGGTTAAGTTTCAGCTTTCAAGAGTTACTTTGGAACCAATGCTTAAGTCTATGGCCAGCATTAGTGAACAACTCTCAAAACCAGCAAATAAGGTTGCTGTAATAAATCTCAACCTTCAAGACGTGGATACAAATTTCGGTGAGTCTGAAGTTAGGTTTCAGGTGTCCAAGGATACATTGGGTGCCATGCTACGATCAATGGCCTATATCCGTGAACAACTATCTCATGTTGGTGATGCACATTCAGAACCTCTATTGAAAAAGCATAAGAAGTAA 2649 0.402 MDVHVINVEEESDHQSADDRDTEPSDGEINNAESSGFYVEEGISDPYLGMEFDSEDAAKAFYYEYAKHAGFISKVGSRSSSKANGQDMYREFVCEREGLNKRFNDGCNAMIKIELKGQNKWVVTKFVKEHSHSLMSSSKSQKLHPRKHFSSVGRTMPETYQGIGLVPSGVMYVSMDGNHVSNQNTSAVLNIHASTAVDPSTPVKNATSVNYTARPPSQNRTLGKDAHILLEYFKKMQGENPGFFYAIQLDEDNHMSNVFWADARSRTAYSHFGDAIHLDTTCRVNQYSVPFAPFTGVNNHGQLVLFGCALLFDDSEASFLWLFKTFLSAMNERQPVSIITDQDIVIQEAVSQVFPQARHCINKWHVLREGQEKLAHVCLAHPNFQGELYNCINRTETIEEFESSWNSILDKYKLRRNDWLQLLYNARAQWAPAYFHDSFFAAISPNQGFGGSFFEGYINQQMTLPLFFRQYERALESWIEKEIEADFETICTTPVLKTPSPMEKQAANLYTRKIFLKFQDELVETFVYTANIIEGDDVNSTFKVAKFEDVNKAYTVSFNHAELRANCSCQMFEYSGILCRHILTVFTMTNVLTLPSHYILKRWTKNAKSSAGSDECTGELHGQESLTLRYSNLCREAIRYAEEGAVTVETYNVAVTGLKEGGKKVTAMKKSVAKATPPNSQASGTNNNKKTTTSSTLDSTPLLWPRQDEITGRFNLNDSGGPVQSVADLNLPRMTPVSLHRDGGPSGNMVVLPCLKAMTWVMENKNSSLGSKVAVINLKLQDNSRNPSTEFEVKFQLSRVTLEPMLKSMASISEQLSKPANKVAVINLNLQDVDTNFGESEVRFQVSKDTLGAMLRSMAYIREQLSHVGDAHSEPLLKKHKK* 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0713 882 Pfam FAR1 DNA-binding domain 61 135 IPR004330 -
Tpr2g0713 882 MobiDBLite consensus disorder prediction 9 27 - -
Tpr2g0713 882 ProSiteProfiles Zinc finger SWIM-type profile. 554 590 IPR007527 GO:0008270
Tpr2g0713 882 Pfam MULE transposase domain 276 367 IPR018289 -
Tpr2g0713 882 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 35 810 IPR031052 GO:0006355
Tpr2g0713 882 Pfam SWIM zinc finger 562 589 IPR007527 GO:0008270
Tpr2g0713 882 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 35 810 - -
Tpr2g0713 882 MobiDBLite consensus disorder prediction 9 35 - -
Tpr2g0713 882 MobiDBLite consensus disorder prediction 673 698 - -
Tpr2g0713 882 SMART 26again6 565 592 IPR006564 GO:0008270
Tpr2g0713 882 MobiDBLite consensus disorder prediction 669 698 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0713 Tpr-Chr2 8188738 8195754 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr2g0713 MULE 1.2e-21 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0713 - - gmx:100786516 1383.24