Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0711 ATGGATACTTGTGTTGGTTTTGATGGTGAAGCTAGTGGAGTTGATAGCTATAATGGTGAACAAGAAAGTTGGGAGCCTGCAACAGGGATGTCTTTTTCTTCTATAGATGAGGTGAAATCATTTTATGGAAAGTATGCTTCAATAAAAGGTTTTGGATGGAAGATTAGAACATCAAGGAAAGGAGAGGATGGGAAGTTAAATTACTTAATGTTGTCATGCTCAAGAGAAGGTCGTCGTGTGTCAGAAATACCACGTACATTGAAGACACTTCCAACTAAAGTGAAAAATTGTCCTTCAAAGATTACTATTAAGTTGGCAAAAGATGAACTATGGTATATTAAAAAGTTTGAACCTAACCACTCTCACACAATTAGCCCCACTAAGTCAAGGTTATTCAAGGCAAACAAAAATATCAGCATGCATGTAAAGAGAACAATCCATATCAACGATGACGCAGGGGTGAGGATCAACAAGACCTTTCAGACTCTTGTTCGAGATGCCGGAGGTTATGAAAATGTAGCATTTTTTGAAAGGGATGTTAGGAATTTTGTTAACAAGGAAAGACGTGTCATTGGAAAAGACGGAGATGCCAAAGCATTGATAAGCTATTTTTGTCAAATGAGGGAGCAAAATACAAATTTCTTCTACAATATAGATTTGGATGATGATTTTCATGTACGAAACGTGTTTTGGGCTGATGCAAGAAGTAGAACTGCATATGAATCTTTTGGAGATGTTGTTACTTTTGATACAACATATTTGACCAATAAATATGACATGCCTTTTGCTGCATTTGTTGGTGTGAATCACCATGGTCAATCAACTTTACTTGGATGTGGTCTACTTTCAGCTGAAGACACAGAATCATTTGTGTGGCTTTTTCAATCTTGGCTTCGTTGTATGTTAGGAAAGGCTCCTGCAGGTATTGTCACTGACCAATGTAAGGCTATGCAAAATGCGATCGAGTTAGTATTCCCTACTACTAGACATAGGTGGTGTTTGTGGCATATAATGAAAAAAATCCCTGAAAAGCTAAGTAGATATGGTGAATATAAAAATATTACATTTGCAATGAAAGAAGCGGTTTATGATACAATCACACCAACTGAGTTTGAAGAAAAATGGTGTTCTTTTGTCAACAAATTTAAGCTGGAACATAATGATTGGTTGAGTGGGTTGTACAAAGAGTGTCATAGATGGGTGCCAATTATGTTGAAGAAATATTTTTGGGCTGGTATGTCGACAACACAACGAAGTGAGAGCATACATGCTTTCTTTGATGGATATATCAAATCGACAACCACTCTGCGTCAATTTGTAAAGCAATACGATAATGCTCTTAGAAGTAGAGCAGAAAAAGAATTTGAAGCTGATTTTCAATCAATGGATACAATTATTCCTTGTGGGTCAAACTCGTTGATCGAAAAGCAATTCCAAGTTGAATACACTCATGCAAAGTTTAAGGAGGTTCAAGTTGAATTCAGAGCTAAAATGAATTGTGTTCCCTCCTTAAAGACCGAGGAAGGTAACCTTGCTACTTACCATGTGTTGGAGGAGATGTTAGTTGGAGATAGAACAAAAGATCGTATCGTTAAAGTTGTTTTTGATCGTGGCAATCATGATGTTAGTTGTGAATGTTCATTGTTTGAGTTTAGAGGTATTTTGTGTCGTCATGTGCTATGTGTGTGTACTCAAGAAAGAGTTAAAAACATGCCACTGAAATATGTTTTAGTAAGATGGAGCAAAAATGTTAAAAGGAAGCATTCATATATTAAGTGTAGCTATAGTGTGACGGAATTGAAGCCGCAAATGGATAGGTTTGACAACTTATGCAAGCATTTTTATGAGGTTGCTGAAGTGGCTGCTGATTTTGAAGATGCAACTAAGGCTCTCCATCAAAGACTTCATGAATTTAAATCTAATTTGTTATGCATGGTTGCTACAAGTAACAATGTTAACAAAAGTTCTAACAATGACTCAAATCCAAATAACATTACTAGGAGGAATGAAAATATGATTACTGAGATTCGTAGTCCATTGCGAGTCACACGTAAAGGTCGTCCTCCATTAAATAGAAAAATATCAGCAGTTGAAAAAGTTGTGCAGAAATGCAAGAAGCGGAGGACCAATAAAAGGGGCGACAAATTGACAACTAAGGTTGACGTTGTGACTGATGGTGTTGTAAATGTTGGAGGTAATGCGTCATTCACAGATCTTTTAACAACATCAGAAATAGATTTCACGGGATCCTCAGAGTTCAGCACAAACTAG 2271 0.3668 MDTCVGFDGEASGVDSYNGEQESWEPATGMSFSSIDEVKSFYGKYASIKGFGWKIRTSRKGEDGKLNYLMLSCSREGRRVSEIPRTLKTLPTKVKNCPSKITIKLAKDELWYIKKFEPNHSHTISPTKSRLFKANKNISMHVKRTIHINDDAGVRINKTFQTLVRDAGGYENVAFFERDVRNFVNKERRVIGKDGDAKALISYFCQMREQNTNFFYNIDLDDDFHVRNVFWADARSRTAYESFGDVVTFDTTYLTNKYDMPFAAFVGVNHHGQSTLLGCGLLSAEDTESFVWLFQSWLRCMLGKAPAGIVTDQCKAMQNAIELVFPTTRHRWCLWHIMKKIPEKLSRYGEYKNITFAMKEAVYDTITPTEFEEKWCSFVNKFKLEHNDWLSGLYKECHRWVPIMLKKYFWAGMSTTQRSESIHAFFDGYIKSTTTLRQFVKQYDNALRSRAEKEFEADFQSMDTIIPCGSNSLIEKQFQVEYTHAKFKEVQVEFRAKMNCVPSLKTEEGNLATYHVLEEMLVGDRTKDRIVKVVFDRGNHDVSCECSLFEFRGILCRHVLCVCTQERVKNMPLKYVLVRWSKNVKRKHSYIKCSYSVTELKPQMDRFDNLCKHFYEVAEVAADFEDATKALHQRLHEFKSNLLCMVATSNNVNKSSNNDSNPNNITRRNENMITEIRSPLRVTRKGRPPLNRKISAVEKVVQKCKKRRTNKRGDKLTTKVDVVTDGVVNVGGNASFTDLLTTSEIDFTGSSEFSTN* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0711 756 ProSiteProfiles Zinc finger SWIM-type profile. 529 567 IPR007527 GO:0008270
Tpr2g0711 756 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 13 647 IPR031052 GO:0006355
Tpr2g0711 756 PANTHER OS03G0843700 PROTEIN 13 647 - -
Tpr2g0711 756 Pfam FAR1 DNA-binding domain 40 125 IPR004330 -
Tpr2g0711 756 Pfam MULE transposase domain 246 340 IPR018289 -
Tpr2g0711 756 SMART 26again6 542 569 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0711 Tpr-Chr2 8175470 8177740 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr2g0711 MULE 1.3e-34 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0711 - - gmx:102667848 811.216