LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr2g0693	ATGGATTTTCAGAGGGTAGAGGTTATAAGCATGGCAGTGGCTCTTGTTGCCATTGTTGGTGGCACCGCTTACTATTACTATCTCACCAAGAAACCTAAAGGGTGCTTGGATCCTGAGAACTTCAAGGAATTTAAGCTTGTCAAACGCACTCAACTCAGTCATAATGTTGCCACATTCAGATTTAATCTTCCCAATTCTAGCTCGGTGTTGGGACTTCCTATTGGACAACATATCAGCTGCAGAGGGAAAGATAGTCTTGGTGAAGAAGTAATCAAACCATATACTCCAACAACATTGGACACTGATGTTGGATACTTTGAATTGGTTGTTAAGATGTATCCACAAGGAAGAATGTCTCATCACTTTAGTGAGATGCGCGAAGGTGATTACTTAGCTGTGAAAGGACCAAAGGGACGTTTTAAGTACCAACCCAACGAAGTAAAAGCTTTTGGAATGATTGCTGGTGGCACTGGCATCACACCAATGTTTCAGGTTGCAAGAGCTATACTAGAAAATCCACAAGACAAAACCAATGTAAATTTGATATATGCCAATGTCACATATGATGACATTCTTCTAAAGGAAGAGCTGGATGACTTGGCAATTAAGTTCCCAAACCGATTTAAAGTTTATTATGTTCTAAATCAGCCACCAGAAATATGGAATGGTGGAGTTGGATTTGTATCCAAGGAAATGATACAAGCACATTTACCTGAACCAGCATCTGATATTAAGATACTAAGGTGTGGACCACCTCCCATGAACAAGGCTATGGCTGCTCACCTTGAAGCTCTTGGATACAGTCCCCAAATGCAGTTTCAGTTTTAG	828	0.407	MDFQRVEVISMAVALVAIVGGTAYYYYLTKKPKGCLDPENFKEFKLVKRTQLSHNVATFRFNLPNSSSVLGLPIGQHISCRGKDSLGEEVIKPYTPTTLDTDVGYFELVVKMYPQGRMSHHFSEMREGDYLAVKGPKGRFKYQPNEVKAFGMIAGGTGITPMFQVARAILENPQDKTNVNLIYANVTYDDILLKEELDDLAIKFPNRFKVYYVLNQPPEIWNGGVGFVSKEMIQAHLPEPASDIKILRCGPPPMNKAMAAHLEALGYSPQMQFQF*	276

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr2g0693	275	SUPERFAMILY	Riboflavin synthase domain-like	32	145	IPR017938	-
	Tpr2g0693	275	SUPERFAMILY	Ferredoxin reductase-like, C-terminal NADP-linked domain	131	270	IPR039261	-
	Tpr2g0693	275	Pfam	Oxidoreductase FAD-binding domain	44	142	IPR008333	-
	Tpr2g0693	275	PANTHER	NADH-CYTOCHROME B5 REDUCTASE	4	275	-	-
	Tpr2g0693	275	PANTHER	NADH-CYTOCHROME B5 REDUCTASE	4	275	IPR001834	GO:0016491
	Tpr2g0693	275	Pfam	Oxidoreductase NAD-binding domain	152	258	IPR001433	GO:0016491
	Tpr2g0693	275	ProSiteProfiles	Ferredoxin reductase-type FAD binding domain profile.	39	143	IPR017927	GO:0016491
	Tpr2g0693	275	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	151	170	IPR001709	GO:0016491
	Tpr2g0693	275	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	189	200	IPR001709	GO:0016491
	Tpr2g0693	275	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	245	253	IPR001709	GO:0016491
	Tpr2g0693	275	PRINTS	Cytochrome B5 reductase signature	70	81	-	-
	Tpr2g0693	275	PRINTS	Cytochrome B5 reductase signature	92	99	-	-
	Tpr2g0693	275	PRINTS	Cytochrome B5 reductase signature	128	142	-	-
	Tpr2g0693	275	PRINTS	Cytochrome B5 reductase signature	151	170	-	-
	Tpr2g0693	275	PRINTS	Cytochrome B5 reductase signature	189	200	-	-
	Tpr2g0693	275	PRINTS	Cytochrome B5 reductase signature	245	253	-	-
	Tpr2g0693	275	Gene3D	-	132	275	IPR039261	-
	Tpr2g0693	275	CDD	cyt_b5_reduct_like	44	275	-	-
	Tpr2g0693	275	Gene3D	Translation factors	32	131	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr2g0693	Tpr-Chr2	7907475	7911480	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr2g0693	24	275	NADPH P450 reductases	AT5G17770	80.159	3.05e-156	434

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr2g0693	K00326		-	gmx:100812559	503.056