Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0690 ATGAAGACGGTTTCTCTCTATGCTTGTTTATTACTCAACTTGAGTCTTTTGGTTATTTTTCCTTATAGCAAAGCTAATCAAGCTGATAAACTTGATGAGTTGATTCTGTCTAGAAGCTCACAAAATCCTCCTAATCCTAAGACTTTTACTTGGGAAGAGGAAGATACATTGAATACACAATCATCTTCTGCTTATGTTATACCTCAATTGGGAGAACAGAAAGCTGATAGGATTGTCACATTGCCTGGTCAGCCTTATGGAGTGAATTTTGAACACTACTCTGGCTATGTCACTGTTGATGCTGAGGCTGGAAGAGAACTTTTCTATTACTTTGTTGAGTCTCCATATAACCCTTCAACTAAACCTTTAATATTGTGGCTCAATGGAGGACCTGGTTGTTCCTCACTTGGATATGGCGCCTTTGAGGAGCTAGGACCTTTCAGAGTCAACTCAGATGGCAAAACACTATACCGAAACAAATATGCTTGGAATGAAGTTGCAAATGTGCTATTCTTAGAATCTCCAGCAGGAGTAGGATTTTCCCATTCAAACACAACTTCTGATTATGACAAGTCAGGAGATAAGAGAACTGCCCAAGATGCTTATGTCTTCCTAATCAACTGGCTGGAGAGATTTCCACAGTACAAAACAAGAGATTTTTATATAACTGGAGAGAGTTATGCTGGTCATTATGTTCCTCAACTTGCATCCACTATTATTTACAACAATATACACTATAAACAAACACTTATTAACCTCAAAGGCATTTCTATAGGGAATGCTTGGATTGATGATGCCACTAGTTTGAAGGGGTTATTTGATTACTTATGGACACATGCTTTGAACTCAGATCAAACTCATGAGTTAATTGAGAAGTACTGTGACTTTACTACAGAAAATACTTCAGCAATATGTAACAATGCAACGACAAAGGCCTTAATTGAGAAAGGACACATAGACTTCTATAACATCTATGCTCCACTGTGTCATGACTCTTCTCTCAAAAATAGTTCAACTGGTTATGTAACTAAAGATTTTGACCCTTGTTCTGATTTCTATGGTAATGCCTATCTAAATAGACCAGAGGTTCAAAAGGCTCTTCATGCAAAGCCTACAAATTGGAGCCATTGCAGTGAAGTTATTCGTACTTGGAATGACAGTCCAGTTACCATCTTACCCACCATCAAGTATCTCATTGATAGTGGCATTAAATTATGGATATACAGTGGTGATACTGATGCAAGAGTTCCAGTCACATCTTCAAGATATTCAATCAACGCCCTCAAGCTTCCAATCAACTCTGCATGGCGTCCATGGTATTCTGGAAATGAGGTTGGAGGGTATGTGGTAGGATACAAAGGATTGACATTTGTTACCGTAAGAGGAGCAGGACATCTTGTGCCAAGCTGGCAACCAGAAAGGGCTTTGACTTTGATCTCATCATTCATCTTTGGAGTTCTGCCACCTGTTTCACCATCAAATTAA 1485 0.3872 MKTVSLYACLLLNLSLLVIFPYSKANQADKLDELILSRSSQNPPNPKTFTWEEEDTLNTQSSSAYVIPQLGEQKADRIVTLPGQPYGVNFEHYSGYVTVDAEAGRELFYYFVESPYNPSTKPLILWLNGGPGCSSLGYGAFEELGPFRVNSDGKTLYRNKYAWNEVANVLFLESPAGVGFSHSNTTSDYDKSGDKRTAQDAYVFLINWLERFPQYKTRDFYITGESYAGHYVPQLASTIIYNNIHYKQTLINLKGISIGNAWIDDATSLKGLFDYLWTHALNSDQTHELIEKYCDFTTENTSAICNNATTKALIEKGHIDFYNIYAPLCHDSSLKNSSTGYVTKDFDPCSDFYGNAYLNRPEVQKALHAKPTNWSHCSEVIRTWNDSPVTILPTIKYLIDSGIKLWIYSGDTDARVPVTSSRYSINALKLPINSAWRPWYSGNEVGGYVVGYKGLTFVTVRGAGHLVPSWQPERALTLISSFIFGVLPPVSPSN* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0690 494 Gene3D - 391 485 - -
Tpr2g0690 494 ProSitePatterns Serine carboxypeptidases, serine active site. 222 229 IPR018202 GO:0004185
Tpr2g0690 494 ProSitePatterns Serine carboxypeptidases, histidine active site. 455 472 IPR033124 GO:0004185
Tpr2g0690 494 Pfam Serine carboxypeptidase 82 484 IPR001563 GO:0004185|GO:0006508
Tpr2g0690 494 SUPERFAMILY alpha/beta-Hydrolases 73 487 IPR029058 -
Tpr2g0690 494 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 19 490 IPR001563 GO:0004185|GO:0006508
Tpr2g0690 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 171 IPR001563 GO:0004185|GO:0006508
Tpr2g0690 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 182 IPR001563 GO:0004185|GO:0006508
Tpr2g0690 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 208 233 IPR001563 GO:0004185|GO:0006508
Tpr2g0690 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 455 468 IPR001563 GO:0004185|GO:0006508
Tpr2g0690 494 Gene3D - 349 383 - -
Tpr2g0690 494 PANTHER CARBOXYPEPTIDASE 19 490 - -
Tpr2g0690 494 Gene3D alpha/beta hydrolase 72 331 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0690 Tpr-Chr2 7867448 7870167 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0690 357 485 Calmodulin-binding Proteins AT2G22960 29.412 4.04e-12 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0690 K16297 - gmx:100779407 803.512