Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0675 ATGCAAAAAACCATAGGCGCTTCCTCTTCGAAAACATTTGATGTTTTTATTAGCTTTCGCGGTGAGGATACTCGTAGAAAATTCACAAGCCATCTTTATGATGCTCTGAGCATGAAAGTTCGAACATTTATTGACGAAAATGAGCTTGAAAAAGGAGATGAGATATCTTCAGCACTTATCAAAGCCATTAAGGAGGCATATGCATCTTTAGTAATCTTCTCAAAAAACTATGCTTCCTCAAAATGGTGCTTGAATGAACTGGTCAAAATTCTTGAATGCAAGAAAGAACAAGGACAAATTGTGATACCTGTTTTCTATGAAGTAAATCCATCACATGTGAGGAATCAGAGAGGGAGTTATGGACAAGCTTTTGAAAACCATGAGCAAGATTTGAGGCAGAGCAAAGACAAGTTGCAGAAATGGAGAAATGCTCTCACTGAAGCAGCCAATTTATCTGGGTGGCACTCTCAAAATTACAGGATTGAATCAAATTTCATCAAGGAAATTGTCGAAGATATTTTGAAAAAATTGAATCGTAAACATCCGTCTGATAAGGAATTTGTTGGAACTGAGAAAAAGTATGAAGAGACTGAATTGTTAACGAAAATTGGATCAAATGATGTTAGAACCCTTGGATTATGTGGCATAAGTGGCATAAGAAAGACCACCCTAGCTAAAGATTTATATGTTAAACTGTTTTCTAAATTTAATAAGCCGAGTAGAGTGCAAAAACGTGAGACGAGTAAGTTTGTTTTCTTTGAAGGAAGTTCTTATAATTTTGATCTTGAAGACATACTTAGAGCTTCAGCAGAAGTTCTTGGACAATTTAGCTATGGCAGCTCATATAAGGCTACATTATTATCGGAGGAGGAGGAGGCAATGATAGTTGTGGTGATAAGGTTGGAAGAAGTTGTGGTAGGCAAAAAGGAGTTTGAACAACATATGGAGATTTTGGACAGGGTCGGACAACACACAAACGTTGTGCCGCTTCGCGCTTATTATTATTCGAAAGATGAAAAACTTATGGTTTATGACTATGTCCCAGCTGGCAACTTATCCACACACTTGCATGGAAGTCGATCAGGTGGAAGAACTCCATTAGATTGGGGCTCGAGAGTAAAAGTTTCTCTTGGAACTGCAAGAGGAATTGCGCACATCCATTCTGTTGGAGGTACGAAATTCACGCATGGAAATATCATGTCCTCAAATATCCTCCTCAACCATGATAACGACGGTTGTATTTCTTATTTTGGCCTGACCTCACTTATCAATGTTCCTGCAAACTCTTCTGGAGTTGCAGGTTATCGCGCTCCTGAGGTGATTGAAACCGGTAAGCACTCTCATAAATCAGATGTCTACAGCTATGGTGTCCTCCTTCTCGAATTGCTTACAGGTAAAGCGCCTCTACAGTCTGCTGGACACAATGGTATGGTTGTTGATCTCCCTAGGTGGATTCACTGTGTTGTTCGGGAGGAATGGACAGACGAGGTTTTCGATGTTGAGCTAATGAAGTACCAAAACATGGATGAAGAAATGGTGCAAATGTTGAAAATTGCCATGAAATGTGTTGCAGAGATGCCTGATATGAGACCTAACATGGTAGAAGTGGTAAGAATGATCGAAGAGATCCGGCCGGTAATCTGA 1644 0.3966 MQKTIGASSSKTFDVFISFRGEDTRRKFTSHLYDALSMKVRTFIDENELEKGDEISSALIKAIKEAYASLVIFSKNYASSKWCLNELVKILECKKEQGQIVIPVFYEVNPSHVRNQRGSYGQAFENHEQDLRQSKDKLQKWRNALTEAANLSGWHSQNYRIESNFIKEIVEDILKKLNRKHPSDKEFVGTEKKYEETELLTKIGSNDVRTLGLCGISGIRKTTLAKDLYVKLFSKFNKPSRVQKRETSKFVFFEGSSYNFDLEDILRASAEVLGQFSYGSSYKATLLSEEEEAMIVVVIRLEEVVVGKKEFEQHMEILDRVGQHTNVVPLRAYYYSKDEKLMVYDYVPAGNLSTHLHGSRSGGRTPLDWGSRVKVSLGTARGIAHIHSVGGTKFTHGNIMSSNILLNHDNDGCISYFGLTSLINVPANSSGVAGYRAPEVIETGKHSHKSDVYSYGVLLLELLTGKAPLQSAGHNGMVVDLPRWIHCVVREEWTDEVFDVELMKYQNMDEEMVQMLKIAMKCVAEMPDMRPNMVEVVRMIEEIRPVI* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0675 547 PANTHER OS05G0588300 PROTEIN 239 544 - -
Tpr2g0675 547 PANTHER LRR RECEPTOR-LIKE KINASE 239 544 - -
Tpr2g0675 547 Gene3D - 9 184 IPR035897 -
Tpr2g0675 547 SMART till_3 12 151 IPR000157 GO:0007165
Tpr2g0675 547 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 154 IPR035897 -
Tpr2g0675 547 ProSiteProfiles TIR domain profile. 11 177 IPR000157 GO:0007165
Tpr2g0675 547 Pfam TIR domain 13 186 IPR000157 GO:0007165
Tpr2g0675 547 ProSiteProfiles Protein kinase domain profile. 267 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g0675 547 SUPERFAMILY Protein kinase-like (PK-like) 271 543 IPR011009 -
Tpr2g0675 547 Coils Coil 124 151 - -
Tpr2g0675 547 Pfam Protein tyrosine and serine/threonine kinase 271 539 IPR001245 GO:0004672|GO:0006468
Tpr2g0675 547 Gene3D Transferase(Phosphotransferase) domain 1 347 546 - -
Tpr2g0675 547 Gene3D Phosphorylase Kinase; domain 1 233 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0675 Tpr-Chr2 7631613 7660434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0675 240 544 Receptor kinase-like Gene Family AT5G58300 66.230 1.02e-144 430
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tpr2g0675 PK_Tyr_Ser-Thr 1.1e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0675 - - gmx:100796171 468.003