LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr2g0670	ATGGCTTACAATCTGAAATTGTTCTCAATTACTCTTCTGATCTGCATAATCTTTTCACCAACTGAAACAGCATCAACATTCAGCCATTACAATTGCACAAAAATAGAAACATTTAGTCCAAATAGCAACTACAAAATCAATCTAAACACACTCTTATCAACACTTTCATCAAAAGCTTCTGATAAAATCAACAATGGCTACTACAATACTAGTATTAGTACAATTGGTGGAACGGAAGACACAATCTATGGTCTTTTCATGTGCATTGGACACACACAGCACTGTGGAGATTGTGTTAAAAACTCTGCCAAAACACTTACCTCAATGTGTGATTCCAAAAAAGAAGCTATAATTTGGTCTGATGAATGCATGGTGCATTATTCCGGACGGTCTTTCTTCGAAACTATGGAAGAATCTCCATCATGGTGTGTGAAAGACTCGTTAGATTATAAAGGTTCATTTGATGGATTCAACAAAAAGCTAAGTTCTTTAATGGTGAATCTTTTAACAGAAGTAAATAAAGCTTCACCGCGAAATGCTACTAAATTTGTTCTCAGGAGATCAATTTTCTTTGAGGATAAATTCTTGAATGGGCTTGCTCAGTGCATACCACATATCTCTAATGATAACTGCATGAAGTGTTTGAAGGATGCTATTGATTATCTTCAAACTTCTTGTGCTAGAGGAAAGATTAGAGGAAGTGTTTTATATCCAAGTTGCATTGTTAGATATGATCCTTATCCATTTTTTGCACAACCTATAGGAGCAAAAAAGAAAAATGAACCAGACCCATTTTTCATAATTTTTCATATTGTTGCTCCTGTCATGGTTGTCTCTGTCACGGTATTCCTTTTCGCGTATTATGTGCTATGTAGGAGAGCAAGGAAGAATCTCAAGTACCACAAAGAAAATTTTGGGGGAGATATTTCATCAGAAGTAAACACTCTGCAATTTGATTTCAATATGATTCGACTAGCGACAAACAAGTTCTCTGATGATAACAAGATAGGAGAAGGTGGTTTCGGCGATGTTTATAAGGGAATGTTTCCTAATGGATTTGAAATAGCAGTGAAGAGGCTCATAAGAAATTCAAGTCAAGGAGCTTTGGAATTTAAGAATGAAGTGTTATTAATAGCAAAACTTCAACACAGAAATCTTGTGAGATTATTAGGATTTTGCATTCAAAGGAATGAGAAGATACTAATTTATGAATATATGCACAACAAAAGCCTTGATTATTACCTATTCAGCCCTGAAAACCATAAAAAGTTAACGTGGCACGCACGTTACAAGATTATAAGAGGAATTGCGCGAGGTATTCTTTATCTCCATGAGGATTCTCATCTAAAAATCATACACTGTGATCTTAAACCGAGTAACATTTTGTTGGATGACAAAATGAATGCAAAGATATCAGATTTTGGCTTGGCAAGGATTGTTGCCATTGATCAAATGCAAGGAAATACTAGTATAATTGCTGGAACATACGGTTACATGTCTCCCGAATATGCAATGCTTGGCCAATTTTCTGAGAAATCTGATGTATTCAGCTTTGGAGTTATAATTCTTGAGATTGTCAGTGGAAAAAGAAATATTGATTACAATGGAGTAAATTCCATTGATGACCTCGTTAGCCATGCATGGAAGAAATGGAGAGAAAATAAGGAATTGGAATTATTAGATGCTGCATTGACATACTCATTTTCAGAAACAGAAGTATATAGGTGCATCCAAATTGGTCTACTATGTGTGCAAGAAAATCCAGATCAAAGACCTACTATGGCAACAATTGCTTTGTATTTCAACTGTGATTCAATAGATCTACCATGCCCTCAACAGCCAGCATTTTACATGCGTGGAAAAATAGAAACAAGGGTGGCTAGTAAAATAGCAATGTCAGGTAGACCTAGGAGTTATTCAGTTACAAGGTTTTAA	1935	0.3535	MAYNLKLFSITLLICIIFSPTETASTFSHYNCTKIETFSPNSNYKINLNTLLSTLSSKASDKINNGYYNTSISTIGGTEDTIYGLFMCIGHTQHCGDCVKNSAKTLTSMCDSKKEAIIWSDECMVHYSGRSFFETMEESPSWCVKDSLDYKGSFDGFNKKLSSLMVNLLTEVNKASPRNATKFVLRRSIFFEDKFLNGLAQCIPHISNDNCMKCLKDAIDYLQTSCARGKIRGSVLYPSCIVRYDPYPFFAQPIGAKKKNEPDPFFIIFHIVAPVMVVSVTVFLFAYYVLCRRARKNLKYHKENFGGDISSEVNTLQFDFNMIRLATNKFSDDNKIGEGGFGDVYKGMFPNGFEIAVKRLIRNSSQGALEFKNEVLLIAKLQHRNLVRLLGFCIQRNEKILIYEYMHNKSLDYYLFSPENHKKLTWHARYKIIRGIARGILYLHEDSHLKIIHCDLKPSNILLDDKMNAKISDFGLARIVAIDQMQGNTSIIAGTYGYMSPEYAMLGQFSEKSDVFSFGVIILEIVSGKRNIDYNGVNSIDDLVSHAWKKWRENKELELLDAALTYSFSETEVYRCIQIGLLCVQENPDQRPTMATIALYFNCDSIDLPCPQQPAFYMRGKIETRVASKIAMSGRPRSYSVTRF*	645

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr2g0670	644	ProSiteProfiles	Gnk2-homologous domain profile.	26	132	IPR002902	-
	Tpr2g0670	644	ProSiteProfiles	Gnk2-homologous domain profile.	138	249	IPR002902	-
	Tpr2g0670	644	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	451	463	IPR008271	GO:0004672\|GO:0006468
	Tpr2g0670	644	SMART	serkin_6	330	601	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Tpr2g0670	644	PANTHER	CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN	268	624	-	-
	Tpr2g0670	644	PANTHER	CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN	25	253	-	-
	Tpr2g0670	644	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	25	253	-	-
	Tpr2g0670	644	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	268	624	-	-
	Tpr2g0670	644	Pfam	Protein tyrosine and serine/threonine kinase	333	598	IPR001245	GO:0004672\|GO:0006468
	Tpr2g0670	644	Gene3D	Transferase(Phosphotransferase) domain 1	406	605	-	-
	Tpr2g0670	644	ProSiteProfiles	Protein kinase domain profile.	330	601	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Tpr2g0670	644	SUPERFAMILY	Protein kinase-like (PK-like)	314	619	IPR011009	-
	Tpr2g0670	644	CDD	STKc_IRAK	336	598	-	-
	Tpr2g0670	644	Gene3D	Phosphorylase Kinase; domain 1	292	405	-	-
	Tpr2g0670	644	ProSitePatterns	Protein kinases ATP-binding region signature.	336	358	IPR017441	GO:0005524
	Tpr2g0670	644	Pfam	Salt stress response/antifungal	32	128	IPR002902	-
	Tpr2g0670	644	Pfam	Salt stress response/antifungal	154	245	IPR002902	-
	Tpr2g0670	644	Gene3D	-	145	249	IPR038408	-
	Tpr2g0670	644	Gene3D	-	24	132	IPR038408	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr2g0670	Tpr-Chr2	7567088	7570061	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr2g0670	4	625	Receptor kinase-like Gene Family	AT4G05200	42.154	2.83e-169	498

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Tpr2g0670		PK_Tyr_Ser-Thr	6.4e-46	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr2g0670	-		-	mtr:MTR_3g079850	1072.77