Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0653 ATGGGAACTAACATATTGCTTCAAATTGACACAAATTGGTTAGTTCCACTTGCACATCATGCGTTTCCTTATAAGATTGAGGGTCGTTTTGCGGCGAGAAAGTGCGTCCCCACATTGACAAGAAGGAGTTGTCGAGAGTGTGAATTTGTTATTCATTATGACGATGATAAGACAAGAAGGAGTTCAAATTGGCAGCGGCGGCATTGTGGTTCGGGGATGGGGGAGACTGTCTCTGAATGGGAACTGCAGGAAGGTCGTATGGCGGTTTCAACTTTTCTTCAACAAATGGGTGTGTCGGTTGAGGAATCTGAATCTATCGCATCAAACTCCCCAGCATATCTCAACATGTTAGTTGAAGGTGTTAGGGATTTGGAGCAGTTGTCTTCATCTTCTTCTTCTTCTTCCATGTTGGATGGTAATGGTGTGTTCAACTTGAACTTCAACTACAGAGATAAGATTCTTCACATTGCAGCTCTCAAAGGTGACAAAGGCAAACTAGCCTACTTAGAGAGTCTTGGCTTCACACTCTCTTCCTCTATGAATGTTGCCAGGTATATATCCTCTTCTGCTCACAACAACACCCTCCCATCTCTCATAAACAAGGTTACTTCTATCAAACAACTCCTCTTTCTTCCCACTCACAGTACTCATGATGATCACTATCAATTCCTTATCAAGAATATTCGCCTCATCATGTGCCACTTATCAATTTCATTAGATGAAGATATGCAACACACTTTCTCCTTTTTCGAAAAGGTTCAAGCAAAGCGTGGAGGTCTAAATATTCTTGCTTCTCAAGATGCTGCTTTCCGTTGCTTCATTGAATCATTTCCTCGTATACTTTTGTTATCACTAAATAATCACATCTCACCTATACTGGATTTTTTCCAAAATATTGGGATCCCTGCAGATCGCATTCCAAACATAATATTGGCTTTTCCTCCTATTCTACTCTGGAATGTTCGACTCCTTCAAACTAGAGTTCTCGCCTTGAATCAGATTGATGGCGTGGATAAAGATTATGCCAAGTTGATGCTAAAATATCCGTGGGTTCTATCTACAAGCATTCAAGAGAACTATAAGGAGGTCCTTTTCTTTTTATACTCCGTGAAGGTTCCAAAGACATGGATAGACCATGCAATCAAAAGACAACCTCAACTATTGGGTTGTTCAACTAGCAAGCTGAAGTTGATGGTGGATCAGTTTGCCGAACTAGGAGTTCAAAAGAAAAAGTTGTATCGGGTTATCACTAGAAGTCCTCAGCTATTATTACAAAAGCCCGAACACTTTCAACAGGTTGTTCTGTTCTTTGAAAATATGGGTTTTGATGAAGAAAATATTGGGAAAATACTTGCTCGCTGCCCTGAAATTTTTGCCAGCAGCATTAGTAAAACATTACAAAGGAAGATTGAGTTCCTTAGTAGAATTGGTGTTTCTAAAGCTTACATTCCCGTGGTTATCAGAAAGTATCCAAAACTACTTGTGTCTGACATTGACAAAACCTTACCTCAACGGATAGTGTACTTTATAAAGCTAGGACTTTCAGAGAAGGACATTGCATTTATGGTCTCTAAATTTTCTCCTATACTTGGGTACAGCATAAAGGAAAAAGATGTTCTGAGGCCAAAAATAGAATTTCTGGTGAACACAATGAAGAGGCCAGTAAAAGAAGTGGTCAGCTACCCTAGGTATTTTAGCTATTCACTAGAAAAGAAGATAAAACCAAGATATTGGGTTCTGAAAGGAAGGAATATTGAATGTAGCTTAAAGGATATGCTGGGGAAAAATGATGAAGAATTTGCTGCTGAATTTATGGGTGTTGGAAGGAATTCAGCTCATGATAGGCTGTAA 1851 0.3944 MGTNILLQIDTNWLVPLAHHAFPYKIEGRFAARKCVPTLTRRSCRECEFVIHYDDDKTRRSSNWQRRHCGSGMGETVSEWELQEGRMAVSTFLQQMGVSVEESESIASNSPAYLNMLVEGVRDLEQLSSSSSSSSMLDGNGVFNLNFNYRDKILHIAALKGDKGKLAYLESLGFTLSSSMNVARYISSSAHNNTLPSLINKVTSIKQLLFLPTHSTHDDHYQFLIKNIRLIMCHLSISLDEDMQHTFSFFEKVQAKRGGLNILASQDAAFRCFIESFPRILLLSLNNHISPILDFFQNIGIPADRIPNIILAFPPILLWNVRLLQTRVLALNQIDGVDKDYAKLMLKYPWVLSTSIQENYKEVLFFLYSVKVPKTWIDHAIKRQPQLLGCSTSKLKLMVDQFAELGVQKKKLYRVITRSPQLLLQKPEHFQQVVLFFENMGFDEENIGKILARCPEIFASSISKTLQRKIEFLSRIGVSKAYIPVVIRKYPKLLVSDIDKTLPQRIVYFIKLGLSEKDIAFMVSKFSPILGYSIKEKDVLRPKIEFLVNTMKRPVKEVVSYPRYFSYSLEKKIKPRYWVLKGRNIECSLKDMLGKNDEEFAAEFMGVGRNSAHDRL* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0653 616 Pfam mTERF 293 601 IPR003690 GO:0003690|GO:0006355
Tpr2g0653 616 PANTHER CGI-12 PROTEIN-RELATED 87 612 IPR003690 GO:0003690|GO:0006355
Tpr2g0653 616 Gene3D Transcription termination factor 3, mitochondrial 398 609 IPR038538 -
Tpr2g0653 616 SMART mt_12 378 408 IPR003690 GO:0003690|GO:0006355
Tpr2g0653 616 SMART mt_12 448 479 IPR003690 GO:0003690|GO:0006355
Tpr2g0653 616 SMART mt_12 271 302 IPR003690 GO:0003690|GO:0006355
Tpr2g0653 616 SMART mt_12 484 515 IPR003690 GO:0003690|GO:0006355
Tpr2g0653 616 SMART mt_12 520 554 IPR003690 GO:0003690|GO:0006355
Tpr2g0653 616 SMART mt_12 413 443 IPR003690 GO:0003690|GO:0006355
Tpr2g0653 616 SMART mt_12 555 586 IPR003690 GO:0003690|GO:0006355
Tpr2g0653 616 SMART mt_12 342 373 IPR003690 GO:0003690|GO:0006355
Tpr2g0653 616 PANTHER TRANSCRIPTION TERMINATION FACTOR 4, MITOCHONDRIAL 87 612 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tpr2g0653 mTERF 5.7e-94 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0653 K15032 - gmx:100802127 722.62