Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0643 ATGGCAGCATCATTCTTCTTCGTAACAACAACAATATTGTTCGTTTCTATTCTCATCAACATTGCCTCTTGTATTTCAGACATAGATTCTCTCCTCAAATTGAAAAACTCTCTTCAAAACACCGACGTTGTATTATCTTCATGGAACACATCTGCCCCTCCATGTACAGGTGGTGATGCAAATTGGTCCGGCGTTCTCTGCTACAAAGGACATGTTTGGGGATTCAAACTCGAAAACATGAACCTTAAAGGCAACATTGACGTTGATTCCATCAAGGATTTGCCTTATATCAGAACCCTTAGCCTCATGAACAACCAATTCGATACCCCGTGGCCGGACCTCAACAAACTCTCTGGTCTCAAGACCCTCTACCTGTCGAATAATAAATTTTCCGGCGAGATTCCGGAAGACGCGTTTCATGGGATGCAGTGGTTGAAGAAAATTCATCTGTCTAACAACCAGTTCACTGGTCCTATTCCAACTTCCCTTTCTTCACTGCCGAGACTGATATCATTGAGGTTGGATGGAAACAGATTCAATGGTCCTATTCCTGAATTTCGCAAACCGTTGAAATCATTCAGTGCAGCGAATAATCAATTAGAGGGTGAAATACCTGCCTCCCTTAGCAACATTCCAGCTTCATCTTTTTCTGGTAATGCAAAGCTGTGTGGAGCCCCTTTAGGAGCATGCTTTCCGGAAAAGAAATCATTATCGATAAGTGTGAGCCGTATTGTGGTTGTGGTTCTTGTTAGTCTTGCAATGTTTGTGATTGCAGCAGTAATAATACTTGTCCTTATTAGAAGAAGAAAAAAAAAAGCTGAACAAGAACAACAAGAATCAGGAGTAGTGATTGGTGTAGTTGCCAACACCAGCAGCAGGGATAGTACTGTTCAAAAGAAAGGATCATCGTCATCACCAAATGACGTTTCAGATGATCAAGGTTCAATAAGATCACGCGGAACCAGCAACGGTAGCAGAAGCATGAGGTTATCCTTTGTGAGGGAAGAAATATCAGAACAATTTGATTTGCAAGATCTATTGAGAGCCTCTGCCGAGATATTAGGAAGTGGTTGTTACAGTTCATCCTATAAGGCTGCTATGTTGACTGGCCCCACCGTTGTCGTCAAAAGATTCAAACAGATGAACAATGTTGACAGGCAAGAGTTTCGGGAACACATGCGAAGACTAGGAAGGTTGAATCATCCTAATCTCCTTCCTCTCCTGGCTTACTACTACAAAAGAGATGAGAAACTCTTCATTACCGACTTTGTTCGCAATGGCAGTTTGGCCATTCGCCTTCACGGATACCAAGCGATAGGACAAGAAAGCCTTGATTGGCCGACGAGGTTGAAGATTGTGAAAGGTGTAGCAAAAGGTATTGAATATCTGTACAAAGAGATGCCGAACCTGATTGCGCCTCACGGTCATCTTAAATCCTCAAATGTTCTTCTGAGTGAGTCTTTGGAGCCTCTACTAACTGACTATGGATTAGTACCTGTGATAAACCAGGAAATTGCTCCTGAAATAATGGTTATATACAAGTCACCTGAGTATTTGCAGCAAGGGAGGGTCACTAAGAAGACTGATGTGTGGAGTCTTGGGATACTCATTTTGGAAATTGTAACCGGAAAGTTTCCTGCTAATTTTATACAAGGGAGTGAGTTGAGTTTGGCGAATTGGGTGGAATCTATTGCGCCGGAAGCGTGGAGTAGTGAGGTGTTTGATAAAGATATGGCGTTAACTAGTAACAGTGAGGGAGAGATGGTCAAGCTTTTGAAGATTGCATTGGCTTGTTCTGATATGGATGTTGATAGGAGATTGGATTTGAAAGAAGCAGTTTCGAGAATTCAAGAGATACAAGAAGATACTATTAATGAGGATGATATGTATTCTTCTTCTTAA 1902 0.418 MAASFFFVTTTILFVSILINIASCISDIDSLLKLKNSLQNTDVVLSSWNTSAPPCTGGDANWSGVLCYKGHVWGFKLENMNLKGNIDVDSIKDLPYIRTLSLMNNQFDTPWPDLNKLSGLKTLYLSNNKFSGEIPEDAFHGMQWLKKIHLSNNQFTGPIPTSLSSLPRLISLRLDGNRFNGPIPEFRKPLKSFSAANNQLEGEIPASLSNIPASSFSGNAKLCGAPLGACFPEKKSLSISVSRIVVVVLVSLAMFVIAAVIILVLIRRRKKKAEQEQQESGVVIGVVANTSSRDSTVQKKGSSSSPNDVSDDQGSIRSRGTSNGSRSMRLSFVREEISEQFDLQDLLRASAEILGSGCYSSSYKAAMLTGPTVVVKRFKQMNNVDRQEFREHMRRLGRLNHPNLLPLLAYYYKRDEKLFITDFVRNGSLAIRLHGYQAIGQESLDWPTRLKIVKGVAKGIEYLYKEMPNLIAPHGHLKSSNVLLSESLEPLLTDYGLVPVINQEIAPEIMVIYKSPEYLQQGRVTKKTDVWSLGILILEIVTGKFPANFIQGSELSLANWVESIAPEAWSSEVFDKDMALTSNSEGEMVKLLKIALACSDMDVDRRLDLKEAVSRIQEIQEDTINEDDMYSSS* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0643 633 SUPERFAMILY Protein kinase-like (PK-like) 352 620 IPR011009 -
Tpr2g0643 633 Pfam Leucine rich repeat 119 179 IPR001611 GO:0005515
Tpr2g0643 633 SUPERFAMILY L domain-like 26 226 - -
Tpr2g0643 633 Pfam Leucine rich repeat N-terminal domain 26 67 IPR013210 -
Tpr2g0643 633 Gene3D Transferase(Phosphotransferase) domain 1 424 632 - -
Tpr2g0643 633 ProSiteProfiles Protein kinase domain profile. 348 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g0643 633 Pfam Protein kinase domain 351 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g0643 633 Gene3D Phosphorylase Kinase; domain 1 315 423 - -
Tpr2g0643 633 PANTHER LRR RECEPTOR-LIKE KINASE 11 623 - -
Tpr2g0643 633 Gene3D Ribonuclease Inhibitor 25 187 IPR032675 -
Tpr2g0643 633 MobiDBLite consensus disorder prediction 294 323 - -
Tpr2g0643 633 Gene3D Ribonuclease Inhibitor 190 230 IPR032675 -
Tpr2g0643 633 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0643 Tpr-Chr2 7123724 7127532 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0643 25 632 Receptor kinase-like Gene Family AT5G35390 51.129 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tpr2g0643 Pkinase 7.5e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0643 - - ccaj:109803310 780.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0643 2 7123724 7127532 Tpr2g0643 2 7123724 7127532 ECH
Tpr3g0507 3 5146325 5150166 Tpr2g0643 2 7123724 7127532 PCT