Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0632 ATGTCTCGTGTGTATGTGGGTAATCTGGATTCTAGAGTTTCGGAGAGGGACCTTGAAGATGAATTCCGTGTTTATGGTGTTATTCGAAGTGTCTGGGTTGCTAGGAGACCACCTGGCTATGCTTTTATTGACTTTGATGACCGCAGAGATGCGCAGGATGCTATTCGCGAATTAGATGGTAAGAATGGCTGGAGGGTAGAGCTCTCTCACAATTCTAGAAATGGTGGTAGCGGTGGAGGTGGAGGAGGAGGAGGCGGTCGTGGTCGCGGAGGTGGTGGCGGTGGTTCTGATTTGAAGTGTTATGAGTGTGGTGAACCTGGCCATTTTGCTCGTGAATGTCGCAATCGTGGTGGTGGTGGAGGAAGACGCCGTAGCCGTAGTCCACCTAGATTTCGAAGGAGTCCAAGTTATGGGCGAAGGAGTTACAGTCCTCGTGGGCGGTCACCCAGGCGCCGCAGTGTGTCACCTCGTGGACGCAGCTACAGCAGGTCACCACCTCCTTACCGTGGGCGCGAGGAGGTGCCATATGCTAATGGAAATGGCATTAGGGATCGACGCAGAAGCAGAAGTTAG 573 0.5305 MSRVYVGNLDSRVSERDLEDEFRVYGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELDGKNGWRVELSHNSRNGGSGGGGGGGGGRGRGGGGGGSDLKCYECGEPGHFARECRNRGGGGGRRRSRSPPRFRRSPSYGRRSYSPRGRSPRRRSVSPRGRSYSRSPPPYRGREEVPYANGNGIRDRRRSRS* 191
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0632 190 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 2 73 IPR000504 GO:0003723
Tpr2g0632 190 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 2 182 - -
Tpr2g0632 190 ProSiteProfiles Zinc finger CCHC-type profile. 99 115 IPR001878 GO:0003676|GO:0008270
Tpr2g0632 190 SUPERFAMILY Retrovirus zinc finger-like domains 91 117 IPR036875 GO:0003676|GO:0008270
Tpr2g0632 190 SMART c2hcfinal6 99 115 IPR001878 GO:0003676|GO:0008270
Tpr2g0632 190 SUPERFAMILY RNA-binding domain, RBD 3 96 IPR035979 GO:0003676
Tpr2g0632 190 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR RSZ22A-LIKE ISOFORM X1 2 182 - -
Tpr2g0632 190 MobiDBLite consensus disorder prediction 104 119 - -
Tpr2g0632 190 MobiDBLite consensus disorder prediction 66 190 - -
Tpr2g0632 190 Pfam Zinc knuckle 99 114 IPR001878 GO:0003676|GO:0008270
Tpr2g0632 190 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 4 61 IPR000504 GO:0003723
Tpr2g0632 190 Gene3D - 1 99 IPR012677 -
Tpr2g0632 190 CDD RRM_SRSF3_like 3 71 - -
Tpr2g0632 190 Gene3D - 100 153 - -
Tpr2g0632 190 SMART rrm1_1 3 69 IPR000504 GO:0003723
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tpr2g0632 Tpr-Chr2 7000619 7003832 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0632 2 61 Eukaryotic Initiation Factors Gene Family AT1G49760 37.500 6.27e-06 43.9
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0632 K12896 - sspl:121745482 219.164