Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0589 ATGGAGTCACGTTCGCGTATCAATGCATTTGAATCGATATCAGAGGTTCAGAATTCAGTTTCTGGAGTACCGATACGCCACAGCCTTCCTTTAACATCAGGGATTCCTCGTCCTTCGCGGCCTCCCTTATATAGAAATAACGGTGCAGCTTCTTCTTCTTCCACATGCTTTTTGGAACAAAGACATCATCATAATTATCGAACAAAGAAGATTCACCATCTAAACAGCTTTGTAATTAATCAGAAGCATAAATATCAAGACCGGAACAATGAAGGATTGCCAACAAAATTATGCAGCAAGCAACTGTTTGCGGATGATCCAAAGAATTGTGGCTCAAGTTTCACAGTATTAGAATCCAACAATTGTATCTTAGTTCCATCAAAACGAGCTGTTGTTAATCAACCAAAGAATTACCATTGTCCGTCAGAGGTTAGTTTTTGTCCTAGTCCTCAGAGTAGTTTCTATTCAGCCACTCTATATTCGGAAGCGAAACAAAGTTTCACCAATACTGAAGTCAGTGAGTGTGTTAGTGTTGATAATAAGTCGTATGAAAGCGGAGAAATTTCGACTTCGTGTGATTTTAATGATAGTAGGAAAACCAGCATATGTAGAGCGAGTACCGGAAGTGATGTTAGCGACGAAAGCAACACGAGTAGTTTGAGCAGTGCTGTGTATAAACCTCATAAGGCAAATGATATAAGATGGGAAGCGATTCAAGCTATCCGAGCTCGTGATGGGATGTTGGAAATGAGGCATTTTAGGTTGTTGAAAAGATTGGGAAGTGGAGATATAGGAAATGTATATCTAGCAGAACTTAGTGGCACAAGGACTTCTTTTGCTATGAAACTCATGAACAAAACCGAGCTCGCAAGTCGCAAGAAACTTCTGAGGGCTCAAACGGAAAGAGAGATATTGCAGTCTTTAGATCATCCTTTTTTACCAACATTATATACACACTTTGAGACAGAAAAATTCTCTTGCTTGGTAATGGAGTTTTGTCCTGGAGGTGACCTTCATGGGATCAGGCAAAGACAACCTGGGAAGTATTTCTCGGAGCATGCTGTCAGGTTTTATGTGGCAGAAGTTCTCCTTGCTTTGGAGTACTTGCACATGCTTGGAATCATCTACAGAGACCTTAAACCTGAGAATGTGTTGGTGCGAGAAGACGGTCATATAATGCTTTCTGATTTCGATCTCTCTCTAAGGTGTACTGTCAGTCCAACTCTTGTGAAGTCATCAAACCCGATCGCCGAAACGAAAAGCTCAGGATATTGCATTCAGCCAACATGTGCAATGCAGCCAGACTGCATGCAATCTGCATGCTTTTCACCGCGGTTCCTATCCGGAAAATCCAAGAAAGAGAAAAAGTTCAGATCAAAGAATGACATGCATCACCAAGTGACACCTCTGCCAGAGCTAATGGCTGAGCCAACAAGTGCGCGATCAATGTCCTTTGTAGGCACACACGAGTACTTGGCGCCTGAAATTATTAAAGGCGAAGGACACGGCAGTGCTGTGGATTGGTGGACGTTCGGGATATTCTTATACGAACTCTTGTTTGGTCGAACACCATTCAAAGGTTCAGCAAACCGAGCGACACTGTTTAATGTTGTTGGACAGCCTTTAAGGTTTCCGGAATCTCCTACCGTCAGCTTTGCTGCAAGGGATTTGATCAGAGGTTTACTTGTGAAAGAGCCTCAACACCGTCTTGCCTATAGACGTGGAGCTACCGAAATCAAACAGCATCCGTTCTTTCACAATGTGAACTGGGCACTGATCCGTTGCGCTTATCCGCCAGAGGTACCGAGACAGACCATGATGATGAATCTAACCTCAACCGAAAATGAAGTTTCTGGTAATTATTTAGATGTTGATTTCTTTTGA 1884 0.4252 MESRSRINAFESISEVQNSVSGVPIRHSLPLTSGIPRPSRPPLYRNNGAASSSSTCFLEQRHHHNYRTKKIHHLNSFVINQKHKYQDRNNEGLPTKLCSKQLFADDPKNCGSSFTVLESNNCILVPSKRAVVNQPKNYHCPSEVSFCPSPQSSFYSATLYSEAKQSFTNTEVSECVSVDNKSYESGEISTSCDFNDSRKTSICRASTGSDVSDESNTSSLSSAVYKPHKANDIRWEAIQAIRARDGMLEMRHFRLLKRLGSGDIGNVYLAELSGTRTSFAMKLMNKTELASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHGIRQRQPGKYFSEHAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCTVSPTLVKSSNPIAETKSSGYCIQPTCAMQPDCMQSACFSPRFLSGKSKKEKKFRSKNDMHHQVTPLPELMAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFHNVNWALIRCAYPPEVPRQTMMMNLTSTENEVSGNYLDVDFF* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0589 627 CDD STKc_phototropin_like 251 603 - -
Tpr2g0589 627 Gene3D Phosphorylase Kinase; domain 1 251 336 - -
Tpr2g0589 627 Gene3D Transferase(Phosphotransferase) domain 1 479 603 - -
Tpr2g0589 627 SMART serkin_6 253 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g0589 627 ProSiteProfiles Protein kinase domain profile. 253 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g0589 627 Gene3D Transferase(Phosphotransferase) domain 1 337 408 - -
Tpr2g0589 627 PANTHER FLIPPASE KINASE 1-RELATED 102 625 - -
Tpr2g0589 627 SUPERFAMILY Protein kinase-like (PK-like) 230 609 IPR011009 -
Tpr2g0589 627 Pfam Protein kinase domain 254 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g0589 627 Pfam Protein kinase domain 482 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g0589 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 374 386 IPR008271 GO:0004672|GO:0006468
Tpr2g0589 627 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 102 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0589 Tpr-Chr2 6582223 6586277 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0589 160 627 AGC Kinase Gene Family AT5G47750 69.495 0.0 687
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Tpr2g0589 Pkinase 9.6e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0589 K08286 - gmx:100810909 981.089