Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0586 ATGGAGAAAGAGATTGTGGAAAACCTTTGGAATGGTGATAGTGAAGCTCAAATTCAAGCAGCAATGGAACTTAGTAGATTGTGCAATAAGCAAAAGCTCAAATTGGCAGAAAATGGTGTTATGGTTCCTCTTGTTTCCATGCTTCATTCTGAAAACTATGAAGTCATAGAAGCTTCTCTTTGTGCTTTTCTCAGCCTCTCGTTTGGCAGTGATAGAAACAAGATTCGTATCGTCAGGTACGGAGTTTTGCCAATTTTGTTGAACCTCCTCCATTGTGAAAGCCAGACAGCGATACAATTGTCATTAGCAGCAATGTTAATACTTTCTTCTTGCAAGGCAAATAAGGTAGCCATAGCTTCATCTGGTGCAGTTAAAATTTTGGTTACATATATCAACAATAGTAGCAACACTCACACTCAGTCTCAACTAGATGCTATAGCTACTCTCCATAACCTTACAACCTGCCAAGAGATTATTCCATTGATTGTATCTTCTGGTGTTATATTCTCCTTACTTGAACTTATCCATGGCTCGGTAAAATCATCTTTGTTGGCTGAGAAAGCAATAGGGTTGCTAGAAAATATTGTTTCTTCATCAGAGAGTGCACTTTGTGAGGCTGCTAGTACCGGAGGAGCGATTAGGATATTGGTTGAGACTATTGAAGATGGATCATCACTGGGAAAAGAGCATGCAGTTGGTATACTTCTACTTATATGTCAAAGCTGTAGAGAAAAATATAGAGTGTTGATTTTGACAGACGGAGTGATGCCAGGATTGCTTCAGTTAAGTGTCGATGGAACGTGGAGAGCTAAATCCGTGGCTGGAGAATTGTTGTTTCTTCTAAGAGACTGCTCTAGTTATAGCTCGAGGCGTAAACAAATTAATCATAAGCTAATAGAACAGATGATGGAAGAAATTGATGCAGAAGGTGACAAATTGGCAGATACTACTTTGAGATTGGTAGAGGAGATGATTGCAAAGCTCAATACATGA 993 0.3917 MEKEIVENLWNGDSEAQIQAAMELSRLCNKQKLKLAENGVMVPLVSMLHSENYEVIEASLCAFLSLSFGSDRNKIRIVRYGVLPILLNLLHCESQTAIQLSLAAMLILSSCKANKVAIASSGAVKILVTYINNSSNTHTQSQLDAIATLHNLTTCQEIIPLIVSSGVIFSLLELIHGSVKSSLLAEKAIGLLENIVSSSESALCEAASTGGAIRILVETIEDGSSLGKEHAVGILLLICQSCREKYRVLILTDGVMPGLLQLSVDGTWRAKSVAGELLFLLRDCSSYSSRRKQINHKLIEQMMEEIDAEGDKLADTTLRLVEEMIAKLNT* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0586 330 SMART arm_5 111 154 IPR000225 GO:0005515
Tpr2g0586 330 SMART arm_5 155 197 IPR000225 GO:0005515
Tpr2g0586 330 SMART arm_5 70 110 IPR000225 GO:0005515
Tpr2g0586 330 SMART arm_5 28 68 IPR000225 GO:0005515
Tpr2g0586 330 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 122 167 IPR000225 GO:0005515
Tpr2g0586 330 PANTHER U BOX DOMAIN-CONTAINING 1 310 - -
Tpr2g0586 330 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 310 - -
Tpr2g0586 330 Gene3D - 143 324 IPR011989 -
Tpr2g0586 330 Gene3D - 3 142 IPR011989 -
Tpr2g0586 330 SUPERFAMILY ARM repeat 4 312 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0586 Tpr-Chr2 6554804 6556676 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0586 4 283 U-box Gene Family AT3G54790 30.986 2.10e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0586 - - gmx:100778534 493.041