Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0578 ATGAATACGACGTCGTTTATGGACAAACAGATAATGGATCTGAATTTACCTTCTTCTTCTTCTTCTACTTCTACTCCCAACAACGATATTATCGACCTCATCAAGCTTCGTCATCACGAACAAAAACAACACGAAGAACAACAACAACACGAACAACAAGAAGATGAAGATTCGTCGATTCATCACAACAATGGAATCAAAACCGAAGATATTGTTCCTAGTTATGATTTTCAACCGATTCGTTCACTTCCTGATTTATCGTTTTCAAAACCTTGGAACTCTGATTCCAACTCCAAAAATTACAGTTCTCTGGATTCTTATGAACCTGCAAAGGTGACTGTAGAAAAGGACCAGAGCGCTGTTGATGCTTCAATTTTGTTAGAGATTGATCGAACAATGAAGAAACATATGGACAATTTGCATCATGTTCTGGAAGGTGTTAGTGCACGGTTAACACAAGTAGAAACCAGAACTCACAATCTTGAGAGTTCTATGGATGATTTGAAGGTGACTGTTGGAAATAATCATGGAATCACCGATGGGAAATTGAGGCTGCTGGAGAATATTCTTCGTGAGGTGCAAACAGGAGTACATGATATCAAGGACAAGCAAGATATAGTGCAAGCTCAGCTGCAACTGGCAAAACTACAAGTGTCCAAGACAGATCAACAATCTGAAACTCAAACTAGTGTCACATCAGATCCTGTGCAGCAAACTTCATCTGTGTCTGCATCTGCTCCCCTGCAAACTCAACAATATTTTCCTTCGCCTATTAATCTTCCACAATCAATTCCTGTGGTTTCTCCCCCTAATGCACCTCCTCAACAGGGTTTGCCACCTCCAGTTCAACTTCCAAATCAATTCTCTCAGATCCCAAACCCAACTGTACCTCAGAGAGATCCATACTTACCACCACCTATTCAATCTCAGGAAATCCCAAATCAGCAATATCAACTGCCTTTAACTCAGCAGCCACATCCTCAACCAGGGGCACTTCCGCATCAACAATATCAGCAGGCCCCTCATCCTCAGTACTCTCAGCCATCACCACATCTACCTCAACAACAGCCACCACATTCATCCGGACCTCATCTACCTCAACAACAGCCACCGCATTCATCCGGACCTCATCTACCTCAGCAACAGCCACCGCATTCATCCGGAAATCCACCTCAAATGCAACCTTCACTAGGTCACCATCTAGAGGAACCACCTTATGTTCCTTCTCAGAATTATCCTCCCAATCTCCGCCAGCCACCATCTCAGTCACCCAGTGGACCTCCTCCACCTTCCCAACAGTACTATGGGACACCGCCCCAAGGATATGAACCACCATCGAGTAGATCTGGTTCAAATTATTCTTCTGGATATGGTACATTATCTGGGCCTGCTGAGCCATATCGATATGGCGGGCCACCTCAGTATGGTAGTAAACAGCCACAACTACCCACTGCTTCGGTGGCTTCCAGCGGTGGAAGTGGTTACCCACAGCTCCCTACTGCCCGCCCACTCCCACAAGCAATACCTACTGCATCTGCAGTAAGTGGTGGTTCCGGTTCAGGTTCTCCTGGATCTGGTAACAGGGTTTCTGTCGATGATGTAGTTGATAAGGTTGCTACTATGGGATTCGCTAGAGACCATGTGAGGGCAACAGTTCGGCAGCTGACAGAGAATGGTCAATCAGTTGACCTAAATACAGTGCTGGATAAGCTTATGAATGAAGGTGGTGGTGAAATGCAGCAACAAAGAGGTTGGTTTGGTAGGTAA 1767 0.451 MNTTSFMDKQIMDLNLPSSSSSTSTPNNDIIDLIKLRHHEQKQHEEQQQHEQQEDEDSSIHHNNGIKTEDIVPSYDFQPIRSLPDLSFSKPWNSDSNSKNYSSLDSYEPAKVTVEKDQSAVDASILLEIDRTMKKHMDNLHHVLEGVSARLTQVETRTHNLESSMDDLKVTVGNNHGITDGKLRLLENILREVQTGVHDIKDKQDIVQAQLQLAKLQVSKTDQQSETQTSVTSDPVQQTSSVSASAPLQTQQYFPSPINLPQSIPVVSPPNAPPQQGLPPPVQLPNQFSQIPNPTVPQRDPYLPPPIQSQEIPNQQYQLPLTQQPHPQPGALPHQQYQQAPHPQYSQPSPHLPQQQPPHSSGPHLPQQQPPHSSGPHLPQQQPPHSSGNPPQMQPSLGHHLEEPPYVPSQNYPPNLRQPPSQSPSGPPPPSQQYYGTPPQGYEPPSSRSGSNYSSGYGTLSGPAEPYRYGGPPQYGSKQPQLPTASVASSGGSGYPQLPTARPLPQAIPTASAVSGGSGSGSPGSGNRVSVDDVVDKVATMGFARDHVRATVRQLTENGQSVDLNTVLDKLMNEGGGEMQQQRGWFGR* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0578 588 MobiDBLite consensus disorder prediction 475 494 - -
Tpr2g0578 588 MobiDBLite consensus disorder prediction 329 453 - -
Tpr2g0578 588 Pfam UBA-like domain (DUF1421) 531 574 IPR010820 -
Tpr2g0578 588 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 371 - -
Tpr2g0578 588 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 354 588 - -
Tpr2g0578 588 MobiDBLite consensus disorder prediction 436 453 - -
Tpr2g0578 588 MobiDBLite consensus disorder prediction 329 345 - -
Tpr2g0578 588 PRINTS Proline rich extensin signature 262 274 - -
Tpr2g0578 588 PRINTS Proline rich extensin signature 285 306 - -
Tpr2g0578 588 PRINTS Proline rich extensin signature 340 357 - -
Tpr2g0578 588 PRINTS Proline rich extensin signature 379 404 - -
Tpr2g0578 588 PRINTS Proline rich extensin signature 419 431 - -
Tpr2g0578 588 MobiDBLite consensus disorder prediction 510 529 - -
Tpr2g0578 588 Coils Coil 36 56 - -
Tpr2g0578 588 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 371 - -
Tpr2g0578 588 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 354 588 - -
Tpr2g0578 588 MobiDBLite consensus disorder prediction 346 390 - -
Tpr2g0578 588 MobiDBLite consensus disorder prediction 477 494 - -
Tpr2g0578 588 MobiDBLite consensus disorder prediction 39 61 - -
Tpr2g0578 588 MobiDBLite consensus disorder prediction 511 527 - -
Tpr2g0578 588 MobiDBLite consensus disorder prediction 407 435 - -
Tpr2g0578 588 MobiDBLite consensus disorder prediction 219 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0578 Tpr-Chr2 6475140 6479973 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0578 31 303 Trihelix Transcription Factor Family AT5G14540 43.607 3.49e-56 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0578 - - gmx:100778494 637.876