Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0557 ATGCAAGCAACAACTATGTCATTGTCTTCTTGTTTTCACTCTTCAAACTTCAAAATGCAAACTCTCTTTGTTTCATCTTCTCTTTCAACACCAAGATTTCACCCTTTTCAAAATTCTCATTATCATTCTTTTTCTTCTTCACCACTTAGACTCACCATTGATGGATTTTCATGCCCATCTTCTTCTTTGTTCCAAACTGTTAGAAAGTCTTCAACTTTTCTCCTTTCAAATCCAAAAATTTCATCTTTTAGAGTCTTTGCTGCTTCTGTTCCACAGGCACAAAGTGATGAACCAACTCAACCTTCTGGGTTGGTTCAGTCTTTGCAGCTTGGTTTCATGTTTGCTAGTTGGTATCTCTTGAATATTTACTTCAACATTTACAACAAACAGGTTCTAAAAGTCTATCCATTTCCAGCAACAGTTACAGCATTTCAATTTGGCTTTGCTTCGTTGGTGATTAATTTGATCTGGACTTTGAATCTTCATCCAAGACCAAACATTAGTAGGTCAAAGCTTGTAGCCATTCTTCCACTGGCTGTAGCTCATACATTAGGGAACCTGTTGACCAACATTAGTCTTGGCAAGGTTGCTGTGTCTTTCACTCACACCATCAAAGCTATGGAACCTTTCTTCACTGTTGTTCTTTCATCCCTTCTCCTCGGTGAGATTCCAACTTTATGGGTGCTTTCTTCTCTTTTACCTATTGTTGGGGGAGTGGCACTAGCATCAATGACTGAAGTATCTTTCAATTGGATTGGATTCAGCACTGCAATGGCATCAAACCTTACGAATCAATCGCGGAATGTTTTGAGCAAAAAACTAATGGCTAATGAAGAGGACGCGTTGGACAATATCAATCTCTATTCGGTTATAACCATCATTTCCTTTTTCATGTTGTTACCGTTTGCTATATTTTTGGAGGGTGTCAAGTTTACGCCTTCATACCTGCAAACTGCGGCGAGTCAAGGATTGAATGTTAGAGAGCTATGCATAAGATCAGTTTTGGCTGCATTCTGCTTCCATGCATACCAACAGGTTTCATATGGAATATTAGAGAAGGTGTCACCTGTGACACACTCGGTCGGAAATTGCGTGAAGCGTGTGGTTGTTATCGTCTCTTCGGTTATCTTCTTTCAAACTCCTGTCTCACCTATTAATGCACTTGGAACTGCTATTGCACTTGTTGGTGTTTTCTTGTATTCAAGAGCAAAAAGGATTAAGCCAATGCCAAAAACAAATACAGCATAA 1248 0.3918 MQATTMSLSSCFHSSNFKMQTLFVSSSLSTPRFHPFQNSHYHSFSSSPLRLTIDGFSCPSSSLFQTVRKSSTFLLSNPKISSFRVFAASVPQAQSDEPTQPSGLVQSLQLGFMFASWYLLNIYFNIYNKQVLKVYPFPATVTAFQFGFASLVINLIWTLNLHPRPNISRSKLVAILPLAVAHTLGNLLTNISLGKVAVSFTHTIKAMEPFFTVVLSSLLLGEIPTLWVLSSLLPIVGGVALASMTEVSFNWIGFSTAMASNLTNQSRNVLSKKLMANEEDALDNINLYSVITIISFFMLLPFAIFLEGVKFTPSYLQTAASQGLNVRELCIRSVLAAFCFHAYQQVSYGILEKVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPINALGTAIALVGVFLYSRAKRIKPMPKTNTA* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0557 415 SUPERFAMILY Multidrug resistance efflux transporter EmrE 293 405 - -
Tpr2g0557 415 Pfam Triose-phosphate Transporter family 108 401 IPR004853 -
Tpr2g0557 415 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 108 411 IPR004696 GO:0016021|GO:0022857|GO:0055085
Tpr2g0557 415 SUPERFAMILY Multidrug resistance efflux transporter EmrE 150 245 - -
Tpr2g0557 415 PANTHER SOLUTE CARRIER FAMILY 35 51 408 - -
Tpr2g0557 415 PANTHER PHOSPHOENOLPYRUVATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 51 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0557 Tpr-Chr2 6259546 6264666 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0557 45 412 Antiporters AT5G33320 61.957 3.54e-150 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0557 K15283 - gmx:100819280 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0557 2 6259546 6264666 Tpr2g0557 2 6259546 6264666 ECH