Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0508 ATGAATTCTAGAAGATTAATTCATGTACTTTGGTGTTTCAATCTGTATGTAGCATGTACATTCATTCATGTCTCAAGTGAGAATATCTATAACTCAAAAAAATGTGTGTACCCTGCAATTTACAACTTTGGTGATTCAAATTCAGATACTGGAACTGTATATGCAACATTCACTGGTGTTCAACCTCCTAATGGTATAAGCTTCTTTGGAAACATCTCAGGAAGAGCTTCTGATGGCCGTCTCATCATTGATTTTATCGCTGAAGAATTGAAGCTACCATACCTCAGTGCATATCTGAACTCAGTTGGATCAAATTACAGGCATGGTGCAAACTTTGCAGTTGGAGGCGCATCGATTCGTCCTGGTGGTTATAGTCCATTCCATCTTGGTCTTCAAGTATCTCAATTTATATTGTTCAAGTCACACACCAAAATTCTCTTCAATCAACTCTCTAACAACAGGACAGAACCACCTTTCAAAAGTGGTCTTCCAAGGCCTGAGGAATTTTCCAAGGCCCTTTACACAATTGATATAGGACAAAATGATCTTGCCTATGGTTTTCTGCACACTTCAGAAGAACAAGTTCAAAGGTCAATTCCTGATATCTTGAGCCAATTCTCCGAAGCAGTAAAAGAACTATACAATGAAGGTGCAAGAGTGTTTTGGATTCATAACACAGGTCCAATTGGATGTTTACCCTTCAATTACTTATCTTATGAGCCTAAGCAGGGTAACATAGATGCTATTGGCTGTGTAAAACCTCAGAACAAAATTGCTCAAGAATTTAACAAGAAGTTAAAGGATCAAGTGTTTCAACTAAGGACGAAACTTACATTAGCCAAATTTACATATGTTGATATGTACAAAGCAAAATATGAACTAATCAGCAATGCAAGGAGCCAAGGTTTTGTGAATCTGTTGAACTTCTGTTGCGGAAGTTACACTGGTTACCGCATAAATTGTGGCACTAAAGAAATGATAAATGGAACTGTGAATACAAATCCATGTACAAATCCTTCACAACATATTATTTGGGATGGAATACACTATTCTCAAAGAGCAAATCAATTGATTGCTAAAAAGATCACCTATGGCTCCTTCTCTGATCCACCAGTTTCAATTGGGAAGGCATGCTTATGA 1140 0.3728 MNSRRLIHVLWCFNLYVACTFIHVSSENIYNSKKCVYPAIYNFGDSNSDTGTVYATFTGVQPPNGISFFGNISGRASDGRLIIDFIAEELKLPYLSAYLNSVGSNYRHGANFAVGGASIRPGGYSPFHLGLQVSQFILFKSHTKILFNQLSNNRTEPPFKSGLPRPEEFSKALYTIDIGQNDLAYGFLHTSEEQVQRSIPDILSQFSEAVKELYNEGARVFWIHNTGPIGCLPFNYLSYEPKQGNIDAIGCVKPQNKIAQEFNKKLKDQVFQLRTKLTLAKFTYVDMYKAKYELISNARSQGFVNLLNFCCGSYTGYRINCGTKEMINGTVNTNPCTNPSQHIIWDGIHYSQRANQLIAKKITYGSFSDPPVSIGKACL* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0508 379 Gene3D SGNH hydrolase 26 364 IPR036514 -
Tpr2g0508 379 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 6 378 - -
Tpr2g0508 379 Pfam GDSL-like Lipase/Acylhydrolase 40 362 IPR001087 GO:0016788
Tpr2g0508 379 PANTHER BNAA02G29130D PROTEIN 6 378 - -
Tpr2g0508 379 SUPERFAMILY SGNH hydrolase 39 362 - -
Tpr2g0508 379 CDD SGNH_plant_lipase_like 38 366 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0508 Tpr-Chr2 5814336 5817404 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0508 37 363 Pollen Coat Proteome AT1G75910 28.947 2.47e-28 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0508 - - mtr:MTR_6g007095 695.656