Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0496 ATGGCAAACACACCTAGTAGCTATAGTACTATTCCATCTAATACAAAAGCTTGGGTTTATTCTCAATATGGTAACATAGAAGAAATTCTAAAGTTTGATCCTAATGTACCAACACCACACCCTAAGAAAGATCAAGTTCTCATCAAGGTTGTAGCTGCTGCCCTTAACCCTATTGATACTAAGAGGGCTCTTGGCTATTTCAAGGACACTGACTCTCCTTTGCCAACTGTGCCAGGATATGATGTTGCTGGAGTGGTGGTTAATGTGGGAGATCAAGTGAAAAAATTTAAGATTGGAGATGAAGTTTATGGTGATATTAATGTGAACAGTATAAACGATCCAAAAACTGTTGGTTCTTTGGCAGAGTATACTGTTGCTGAAGAAAAAGTACTTGCTCACAAACCATCAAGTTTGAGCTTTGTTGAAGCTGCCAGCCTCCCTATAGCAACAATTACTGCTTATCAAGGACTTGAAAAAGTTGAGTTTTCTTCTGGTAAATCTATACTTGTTCTCGGAGGTGCCGGTGGAGTTGGATCTCTTGTTATTCAGCTAGCCAAACATGTTTTTGGAGCATCTAGAATTGCAGCTACTGCTAGCACATCAAAACTTGAACTTTTGAAGAAGTTGGGAGCAGACTTGGCTATTGATTATACTAAAGAGAATTATGAAGAACTTGCAGAAAAATTTGATGTGGTGTATGATGCAGTAGGTGAGAGTGAGAGGGGACTAAAGGCAGTTAATGAAGGTGGAAAAGTTGTGACAATAGTGCCGCCCGGAACACCGCCCGCTATCCCTTTCGGACTTACTTCAGACGGAGCTGTGTTAGAGAAATTGAAACCTTACTTGGAGAGTGGCAAGGTGAAGCCAATATTGGATCCTAAGAGTCCTTTTCCATTTTCTCAGACTGTGGAAGCATTTTCTCATCTCAATACTAATAGAGCTATTGGGAAAATAGTTATACATCATATTCCTTAA 975 0.3979 MANTPSSYSTIPSNTKAWVYSQYGNIEEILKFDPNVPTPHPKKDQVLIKVVAAALNPIDTKRALGYFKDTDSPLPTVPGYDVAGVVVNVGDQVKKFKIGDEVYGDINVNSINDPKTVGSLAEYTVAEEKVLAHKPSSLSFVEAASLPIATITAYQGLEKVEFSSGKSILVLGGAGGVGSLVIQLAKHVFGASRIAATASTSKLELLKKLGADLAIDYTKENYEELAEKFDVVYDAVGESERGLKAVNEGGKVVTIVPPGTPPAIPFGLTSDGAVLEKLKPYLESGKVKPILDPKSPFPFSQTVEAFSHLNTNRAIGKIVIHHIP* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0496 324 Gene3D - 157 271 - -
Tpr2g0496 324 SUPERFAMILY GroES-like 12 170 IPR011032 -
Tpr2g0496 324 CDD MDR_like_2 16 320 - -
Tpr2g0496 324 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 138 263 IPR036291 -
Tpr2g0496 324 PANTHER 2-METHYLENE-FURAN-3-ONE REDUCTASE-RELATED 7 324 - -
Tpr2g0496 324 SMART PKS_ER_names_mod 24 320 IPR020843 GO:0016491
Tpr2g0496 324 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 165 186 IPR002364 GO:0008270|GO:0016491
Tpr2g0496 324 Pfam Zinc-binding dehydrogenase 209 320 - -
Tpr2g0496 324 Gene3D - 22 320 - -
Tpr2g0496 324 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 7 324 IPR044626 GO:0016628
Tpr2g0496 324 Pfam Alcohol dehydrogenase GroES-like domain 44 108 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0496 Tpr-Chr2 5747404 5749160 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0496 71 234 Monolignol Biosynthesis Gene Families AT1G72680 27.083 1.03e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0496 K18980 - gmx:100791274 488.804