Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0481 ATGATCATGGAACTCACCGATTCCACCGCCGGTAGTAACAACAACCTCAACAACAACATCCCTCCGCCGCCGCAACAACCACCACCACAATCACCGCCGCTTAACAACTACCAAGACACTCGTTCTATTCTCTGCATCGACCTCAACGAGATCCCTTCACCTTCTTCTTCATTCCCCGAAACCCTACTTGACTCAACAATCGACATCGTTCGTACCTATCACGAGAATCCAGCTCCACCTCCCGGTGGTCCTGCTGCTCTTCCTACTGGTACAACTGCCTGCGTCGTTTGTGCTAAATCCTCATCCTCCTCCGGCGGCGGTGGTAATTGTTTAGTTTGCGACGGCTGTGAGCGGAGTTTTCACCTGGCTTGTGCTGGGATTCGAGGCGGCGGTGGTCGACAAGGTGCTGCAAGTATAGGAGAGTGGGTTTGTGGTGAGTGTTTGGCTAGTGGTGTGAAGAGTAAACGGTGGCCGTTGGGTGTGAAGTCGAAGCAGCTTCTTGATATCAATGCTTCACCACCTAGTGATGTTGATGGGGAGGAGTTGCATGATGCGAGAAAGCACACTATGGGTGATAAATCTCTTGGTGCCAATCAATTTGGTGCTCCAGTCACATATTCGACCTTCAACAATGGAAGTGTGTTTGGCTTCCAAAAGGCATCTGGAGCTGTGACACATGCTGTTAGAGTGGGTTATGAGGATATACTCAATCACACCCAATCAATGGCCAGAAGCTTTGCGGAATTACCATCTCAGACTCAGAGTCCAAATGAGTTAATTTTGCGGGCTCTTAGAGATTTTATTACTGAAAGGCATGGCGTACTGGAGGATGGTTGGCGAGTGGAACTTAGACCATCAATGATCAGCTCTGATCTGTATGCAGTTTATTGTGCACCCGATGGAAAGATATTTGATTCCGTGTATGAAGTAGCTAATTATCTGGGGCTACCGTCTGGCTACAATTCTATGGAATCGGAAGCAAGAAATGAAATGTCTCTTTCTCTAGGTGGGGCTCACCTATCCAGAAAAAGGAAGTCTTCCAGGACTCTGGCAGCCAATGGTTTTGCGGAAAAGCAGGGAACCTTGGTCAATAGTAATTATAAGGATTGTTCTTATGATTTAAGTATGGAATGTGATAATGCTCAGGGGACTGTCCCAAAAGCGACTGAGATTGGAAGAAAAGAGAATGGTCACTCCGACCCTCATCAATCCGTTGATGGACTTCCTGTGCAGTTTAAGGACTTCTATGTTCTTTCTTTGGGAAAAGTTGATGGGAGACCTTCATATTATGATGTTAACCTTATCTTTCCTGTGGGCTATAAATCTTGTTGGCATGACAAGATTACTGGCTCTCTTTTTACGTGCGAAGTTTTGGATGGGGGTGACTCTGGACCTATATTTAGGATTAAAAGGTGTTCATGTTCAGAATTTCCTATTCCAGATGGGTCAATCAGCCTTTCAATGCAAAGTAATTGTCAATTTGTGAGCGAAACCAATGAAGGTCAGAGAGAGACTCGTGAAAGTATGGATTTAGATGGTGATGAGAATTTCCAGATGCTGCTTTTAGAACCTTGTGCACCAACAGAAAACGACATCTTGAGTTGTGTTGCCAGTTTCTCAAATGAAGCATATGCATCAGAAGGATTAAGGCCAGTTGCTGGTTCAGTTCAAGAGATTACTGGAAATTCATTTGCTGATAATATGAATTTTAGTGATGAAATTGGTGATATTTTGGTGGAAGAGCAGTCCTCATCCTCAGCATGGAGAGTTATTTCTCAAAAGTTAATCAATTCTTGCAAGGATATTTGCAAGAAGAAAGGAAGTCTTAAATTCTATTGTAAACATGTTGAGAGTGAAATGGGATTATGGGATTTAAGAAATGGAAAAAGTGATACCCGCTTCACTTTGTTGGATAAATTTTTTGGTTCACCTGTTTCTGTCAGCATTCCAGATACAATTTATGCAGACAATGATCTGAATGGCTTTTATGAGCTGTTAGAGAAATGGTTGGAGCAGGATAGATTTGGATTAGATGCTGAATTTGTGCAAGAATTATTGGAAATGAATCTTGGTGTGCAAGACTCTTTGCAATATGAACTTCTGAGTAGTAGAAATAATAGTTCTTCATTGCCAACAGTAGACAATGGTTTCCTAGTGGTCGAATATAAAGGTCAACCAAAATATCAGGAGGAAGAAGAAGCAGTTCGAGGTTTATATAGAAGGTCTAAGAAGGCAAGATTGACTGAAAAGTACGTTAAGGAAGACCGACGTCCACCTCCTGGGAAACCACTGTGCTCAAGGGCTCCTACTGAACTGATTGGTGACATTTTTCAGGTTTGGGAGCTTTTAGAGCGATTCCGTGAAATTCTAGAACTGAAAGAACCATTGTTATTAGAGGAGCTTGAGAAGGAACTTATCAACCCATGGTTTGATGAATTAGATTTCCCTGAGAAATCTGAGAGGGGAATGGGTGGAAGTCAAGTTTTAACTTCAGGTTCCACGGGAAGTTCTTTTATTCAAGTGGAAACAGAAGCAATGAAAGAGGAAGCCCAAGTTAAGCTTGCATCTTTCACCTATGTCAGATGCTTTGGTGTATCTTTGACCAAGGCCCATAATTCATTACTAAGAGTGCTAATAGGTGAACTGCAATCAAAGGTGGCCGCTTTGGTGGATCCGAATTCTGAACCCGGAGAGACTCGGACAAGACGTGGGAGAAGGAAAGATATAGATAGTGCAGTTCCTGCTAAACGAACCAAGGTCAATATGCTTCCTATCAACGAATTGACATGGCCAGAACTAGCTCGTAGATATATCTTGGCTTTCTTATCAATGGATGGTAACCTTGAGTCTGCGGAAATTACTGCCCGTGAAAGTGGTAAAGTATTTCGTTGCTTACGAGGCGATGGTGGTTTACTGTGCGGTTCCCTTACTGGTGTGGCTGGGATGGAAGCTGATGCACTGTTGCTTGCGGAGGCTACGAAGAAGATTTTTGGTTCTTTGAGCAGAGAAAATGATGTACTCATCATAGAAGAAGAGGAGTCTGATGCTAATGGTGCTTCTGAAATTAAATTGGCAAATGATGGTAAAATTCCTGAATGGGCGCAGGTTCTGGAACCTGTCAGAAAGCTACCAACAAATGTGGGAACCCGAATCAGAAAGTGTGTTAATGACGCTCTAGAGATGAATCCGCCAGATTGGGCAAGGAAAATACTGGTGCACTCAATTAGTAAGGAAGTGTACAAGGGCAATGCATCTGGACCAACAAAGAAAGCAGTTCTTTCAGTGTTGAAAGAGGTAACTGAAGGAGAGCAGTCAAATCCCAACAAGGGAATGAAAAAGAAGATTGTTATATCTATTTCCGACATAATTATGAAACAATGCCGCATTGTATTACGTCGTGCAGCTGCTGCAGACGATTCAAAAGTTTTTTGCAATTTGTTGGGAAGAAAATTAATAAATTCTTCTGATAATGATGATGAGGGACTTCTTGGAACTCCAGCTATGGTGGCCCGCCCTCTCGACTTCCGAACTATTGACCTAAGGTTGGCTTGTGGCGCGTATGGTGGATCTTGTGAAGCTTTTCTCGAGGATGTACATGAGCTGTGGTTCAATGTTCGTGTTGCTTTTGGGGATCAACCTGATTTAGTTGAACTGTCAGAAAAATTATCCCAGAATTTTGAATTTTTATACAATAAGGAGGTTGTCACTTATGTTGAAAAGTTCACTGATTATGCTAAAGCAGGATGCATCAGCGATGAAATGAAAAAAGATATCAACGATTTCATTGCATCAACAAGTCAGATTCCAAAGGCCCCTTGGGATGAGGGGGTTTGCAAAGTATGCGGAATTGACAGGGATGATGACAGTGTTTTACTGTGTGACAAATGTGATGCTGAGTATCATAAATATTGCTTGAATCCTCCACTTGCAAGGATCCCTGAAGGAAACTGGTACTGTCCATCTTGTAATGGTGGTAAACATGCAACTCAAGATGTCACAGAACGTGCACAGATTACTGGAAAACGTAGTAGTAAAAAATTCCAGGGAGAAATTAATTGTCTTTACTTGGAAGCACTAACTCATTTATCGGCTGTAATTGAAGAAAAAGAATATTGGGAGTACAGCGTGGGAGAGAGAACGCTTCTTCTCAAGTTTTTGTGTGATGAGTTGCTCAATTCTTCCCTGATACGACAGCATCTTGAGCAGTGTGCAGAGTTGTCTGTTGAGTTGCATCAGAAATTGCGTGCACTTTCTGTAGAGTGGAAAAGCTTGAAAATTAAGGAAGATGTTTTATCCACAAAAGCTGCAAAATTTGACACATTGTCTCAAATTACCATCGGGGAATTTGGTCTTAAGGAAGGGTTCACATCTTTGTTCTCAAATACTAGTAAATGTCTGGTTAAGCCACATACTACAACCACCAATCCTAGTGGTCCTGGGGCATTTGTTGATAGTCTACCTTCAGAAGAGATTCCCAAAGTGAAGTGTAGGTTCAATAGTGTTGATAAAATATCTGTGGCACATTCAGATTCTGATAACCAGCATATGAATTCTATAGAAGGACAACTTAGGACAGTTCCTGTGGCTGCGGAGTCTCAATGTACAGATAAATCCCTCAAGTCTTTACCATCGTCAAATCATATGCCTCAAGAAATAAATGGCTACAGTGGAGCAACTCATATTCAGGATAACTACCAGAAATGTGAGGTAAGGGACGTATCTACTTGTGTGACATACCAGCAAGGGCAATGTGTGCCTGTTGAAGTTTCCCAAAATGCTGTGAATGAGTCAGAAACATACCACCTTGAGCTCAACGCCGTCAAGCGTAATATTTCACTGCTGCAGGACTCTATAAATAGTGTAGGATCACAGCTTCTGAAGCTCTCTGTTCGCCGGGATTTTTTGGGTATTGATTCCATTGGTCGACTGTACTGGGCTTTGGCTACACCCAGAGGACGTTCACGTATAGTTGTTGATGCAAGTGCTGTTCTTCAGCATGGAAGAGGATTGTCAGTTAGCAAAGATTCTGCAGAGAAGTTTTCTGCTCTGCAGCATTGTGCAGTATTTGAGAGGGATACCTATAAGATGTTAGGGCTGATCAAGGATTCCTCTCCTTTGATGTCCCAACCACTTAATGCTTTTGGCAGTAGTTCACCGTGGATTGTTTATGAAACAGATTCAGAAATTGAAGAGCTATTGGGTTGGTTAAAAGATTGTGACCCTAAAGAAAAAGAACTGAGAGATTCCATCATGCTGGGGCCAAAATATAGACCTCAAGAGTTTATTAATGCACACACTGAAGGTCAGGTTGAGGACCAAGGACCTGTTTATTTGCCAAGAAATACAGTATCTAACTCTCTTGTTACAAAGGCCACTTCTTTGCTGGAAAAGAATTACGGTCCCTTCTTTGAGTTGGATACTGCCGAGGTGTTGAAGAAGCAGAGTAAAAAGGCCAGAACAACTAATGATGAAAAGTTGTATAGGTGTGAGTGCCTAGAACCCATATGGCCTTCTAGGAAACATTGCTTGTATTGCCACAAAACCTTTTTAAGCGATGACGAGTTTGAGGGACACAATGATGGAAAGTGTAATGCCGGACTTCTGGCCTTGGAGAGGAATAAAGAAAAAAATGGGTCTTCTAAAGGCAGAGGGAACATGAAATGTGATGCCTCACATGAAAAATCCAGAGCTGATGCAGAAACAGCTGGAACCTCAATTAATAGATGTTCCAAGCTAAGTTCGAGATTGATCAAGTTTTCAAATGAAAATTCCTCTTGCCCATTTAAGTTCGAAGATATATGCTCAAAATTTGTGACAAATGATTCCAACAAGGAAGTTGTCAGAGAAATTGGTCTTATTGGTTCAGATGGTGTCCCATCCTTTGTGCCTTCCATATCTCCTTTTGTTAGTGATTATACACCATTCTTAGCCCTAAAGGATGGTAGCATTGTTGGTGGTGCTTCTAAAGCTTCAGAAAGCCGGGTTTCTCAGGAAAAAACTGATGGATCTGGCATATGCCATGACCATAAATCAAGCAAATCTGCTGAAAGTTTAGCCGCAAATGAAAGCAACGAAGCAGGGAAATCTAACAAATCATCTTTGGGAGAACAGAGAGATGGAAACTCATCTTTTTGTAGTTCCGCTTCAGATAAGGGAGTTGATGGCTGCTGTGTGGTTCCTTTGTCGTCGTTGAGACCATTAGTTGGAAAAGTTTCTCATATTTTGAAGCAACTAAAAATTAATCTGCTTGATATGGATGCTGCACTTCCGGAAGTTGCTCTAAGACCATCAAAGGCACAGTTAGAAAGAAGACAGGCCTGGTGTGCATTTGTCAAATCTGCAGCGACAATATATGAGATGATTCAGGCAATAATTTCACTGGAGGATATGATTAAGACGGAGTTCTTAAGGAATGACTGGTGGTACTGGTCATCATTCTCAGCTGCTGCAAAGTCTTCTACGTTGCCTTCTCTTGCTCTTCGCATTTACTCCCTTGATTCAGCCATTATGTATGAAAAAATGCCCAATTCAAGTTTAATGGACAGCTCTGATCCTCCTGCCGCAGTGGAACTGAAACCAGTGATCACAGTGGATGCTGATAAATCCAAAGCAAGCCGGAAGTCAAACAGGAAAAGGAAGGAACTAGACAGTTAA 6654 0.4211 MIMELTDSTAGSNNNLNNNIPPPPQQPPPQSPPLNNYQDTRSILCIDLNEIPSPSSSFPETLLDSTIDIVRTYHENPAPPPGGPAALPTGTTACVVCAKSSSSSGGGGNCLVCDGCERSFHLACAGIRGGGGRQGAASIGEWVCGECLASGVKSKRWPLGVKSKQLLDINASPPSDVDGEELHDARKHTMGDKSLGANQFGAPVTYSTFNNGSVFGFQKASGAVTHAVRVGYEDILNHTQSMARSFAELPSQTQSPNELILRALRDFITERHGVLEDGWRVELRPSMISSDLYAVYCAPDGKIFDSVYEVANYLGLPSGYNSMESEARNEMSLSLGGAHLSRKRKSSRTLAANGFAEKQGTLVNSNYKDCSYDLSMECDNAQGTVPKATEIGRKENGHSDPHQSVDGLPVQFKDFYVLSLGKVDGRPSYYDVNLIFPVGYKSCWHDKITGSLFTCEVLDGGDSGPIFRIKRCSCSEFPIPDGSISLSMQSNCQFVSETNEGQRETRESMDLDGDENFQMLLLEPCAPTENDILSCVASFSNEAYASEGLRPVAGSVQEITGNSFADNMNFSDEIGDILVEEQSSSSAWRVISQKLINSCKDICKKKGSLKFYCKHVESEMGLWDLRNGKSDTRFTLLDKFFGSPVSVSIPDTIYADNDLNGFYELLEKWLEQDRFGLDAEFVQELLEMNLGVQDSLQYELLSSRNNSSSLPTVDNGFLVVEYKGQPKYQEEEEAVRGLYRRSKKARLTEKYVKEDRRPPPGKPLCSRAPTELIGDIFQVWELLERFREILELKEPLLLEELEKELINPWFDELDFPEKSERGMGGSQVLTSGSTGSSFIQVETEAMKEEAQVKLASFTYVRCFGVSLTKAHNSLLRVLIGELQSKVAALVDPNSEPGETRTRRGRRKDIDSAVPAKRTKVNMLPINELTWPELARRYILAFLSMDGNLESAEITARESGKVFRCLRGDGGLLCGSLTGVAGMEADALLLAEATKKIFGSLSRENDVLIIEEEESDANGASEIKLANDGKIPEWAQVLEPVRKLPTNVGTRIRKCVNDALEMNPPDWARKILVHSISKEVYKGNASGPTKKAVLSVLKEVTEGEQSNPNKGMKKKIVISISDIIMKQCRIVLRRAAAADDSKVFCNLLGRKLINSSDNDDEGLLGTPAMVARPLDFRTIDLRLACGAYGGSCEAFLEDVHELWFNVRVAFGDQPDLVELSEKLSQNFEFLYNKEVVTYVEKFTDYAKAGCISDEMKKDINDFIASTSQIPKAPWDEGVCKVCGIDRDDDSVLLCDKCDAEYHKYCLNPPLARIPEGNWYCPSCNGGKHATQDVTERAQITGKRSSKKFQGEINCLYLEALTHLSAVIEEKEYWEYSVGERTLLLKFLCDELLNSSLIRQHLEQCAELSVELHQKLRALSVEWKSLKIKEDVLSTKAAKFDTLSQITIGEFGLKEGFTSLFSNTSKCLVKPHTTTTNPSGPGAFVDSLPSEEIPKVKCRFNSVDKISVAHSDSDNQHMNSIEGQLRTVPVAAESQCTDKSLKSLPSSNHMPQEINGYSGATHIQDNYQKCEVRDVSTCVTYQQGQCVPVEVSQNAVNESETYHLELNAVKRNISLLQDSINSVGSQLLKLSVRRDFLGIDSIGRLYWALATPRGRSRIVVDASAVLQHGRGLSVSKDSAEKFSALQHCAVFERDTYKMLGLIKDSSPLMSQPLNAFGSSSPWIVYETDSEIEELLGWLKDCDPKEKELRDSIMLGPKYRPQEFINAHTEGQVEDQGPVYLPRNTVSNSLVTKATSLLEKNYGPFFELDTAEVLKKQSKKARTTNDEKLYRCECLEPIWPSRKHCLYCHKTFLSDDEFEGHNDGKCNAGLLALERNKEKNGSSKGRGNMKCDASHEKSRADAETAGTSINRCSKLSSRLIKFSNENSSCPFKFEDICSKFVTNDSNKEVVREIGLIGSDGVPSFVPSISPFVSDYTPFLALKDGSIVGGASKASESRVSQEKTDGSGICHDHKSSKSAESLAANESNEAGKSNKSSLGEQRDGNSSFCSSASDKGVDGCCVVPLSSLRPLVGKVSHILKQLKINLLDMDAALPEVALRPSKAQLERRQAWCAFVKSAATIYEMIQAIISLEDMIKTEFLRNDWWYWSSFSAAAKSSTLPSLALRIYSLDSAIMYEKMPNSSLMDSSDPPAAVELKPVITVDADKSKASRKSNRKRKELDS* 2218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0481 2217 PANTHER OS02G0192300 PROTEIN 40 2216 - -
Tpr2g0481 2217 ProSitePatterns Zinc finger PHD-type signature. 1278 1322 IPR019786 -
Tpr2g0481 2217 ProSiteProfiles Zinc finger PHD-type profile. 1275 1325 IPR019787 -
Tpr2g0481 2217 ProSiteProfiles FYR domain FYRN motif profile. 407 460 IPR003888 GO:0005634
Tpr2g0481 2217 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1263 1347 IPR013083 -
Tpr2g0481 2217 Gene3D - 408 521 - -
Tpr2g0481 2217 ProSitePatterns Zinc finger PHD-type signature. 94 147 IPR019786 -
Tpr2g0481 2217 MobiDBLite consensus disorder prediction 1 32 - -
Tpr2g0481 2217 MobiDBLite consensus disorder prediction 2016 2035 - -
Tpr2g0481 2217 MobiDBLite consensus disorder prediction 1874 1899 - -
Tpr2g0481 2217 ProSiteProfiles Zinc finger PHD-type profile. 91 150 IPR019787 -
Tpr2g0481 2217 MobiDBLite consensus disorder prediction 1988 2035 - -
Tpr2g0481 2217 Gene3D - 1120 1240 IPR036427 GO:0005515
Tpr2g0481 2217 MobiDBLite consensus disorder prediction 1 19 - -
Tpr2g0481 2217 MobiDBLite consensus disorder prediction 2001 2015 - -
Tpr2g0481 2217 CDD PHD1_Lid2p_like 1277 1322 - -
Tpr2g0481 2217 SMART PHD_3 93 148 IPR001965 -
Tpr2g0481 2217 SMART PHD_3 1277 1323 IPR001965 -
Tpr2g0481 2217 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 87 152 IPR013083 -
Tpr2g0481 2217 Pfam Methyl-CpG binding domain 266 317 IPR001739 GO:0003677
Tpr2g0481 2217 Pfam PHD-finger 94 148 IPR019787 -
Tpr2g0481 2217 Pfam PHD-finger 1277 1323 IPR019787 -
Tpr2g0481 2217 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 9 40 2216 - -
Tpr2g0481 2217 SUPERFAMILY FYVE/PHD zinc finger 84 149 IPR011011 -
Tpr2g0481 2217 SUPERFAMILY Bromodomain 1112 1232 IPR036427 GO:0005515
Tpr2g0481 2217 SUPERFAMILY FYVE/PHD zinc finger 1266 1326 IPR011011 -
Tpr2g0481 2217 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 1357 1401 IPR028942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0481 Tpr-Chr2 5580393 5593430 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0481 38 2214 C2H2 Transcription Factor Family AT3G01460 44.144 0.0 1665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Tpr2g0481 MBD 4.3e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0481 K22768 - gmx:100820223 3032.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0481 2 5580393 5593430 Tpr2g0481 2 5580393 5593430 ECH