Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0472 ATGACAAGAAGATGGTCCTTTTACATGGATTTTCTACCAGTTGTGGTGATCATAGGCTTTGAATGTATTGACATGGGTTTACTCACTTTGTTCAAAGCAGCAACACTTCAAGGGATGAACAATCATGTCTTTATTGCTTATGCTTATGTTGTTGGTACTTCTGTTCTTCTCCCTGTCACTCTTTTCACCAGAAGATCTAGAGTGGTTCCTCCACTCAGTTTCTCCATAATATGGAAAAGTGTACTTCTTGGGGCAATAGGATGTGCATCTCAGATTCTAGGGTATATTGGTATAAATTACAGTTCTCCAACACTTGCTTCAGCAATTGCTAATCTAGTACCTGCTTTCACTTTCATGCTAGCTGTCACTTTCAGGATGGAAAAGTTGGTTGCAATGAGTAGAAGTAGTAATGCTAAGGTAATAGGAAGCATAATCTCAATAGCAGGTGCTTTTGTGTTGACTTTTTACAAAGGACCATCTATAATGAATTCTTCATCACTTCATCAACCAATTGACTTTCTCAAATCAGTGAATTCAAGTTGGGCCATTGCAGGCATTATACTAACAGCTGACTACTTTCTGCTTTCTCTATGGTACATTTTACAGGTACATATCTTGAAAGAGTTTCCAGATGAACTAACTTTAGTCTTGTTATACTCCATAACTGCAACAATCATATCTATAGTTGTAGCTTTGTTATCAGTTCCAGATGCAAGTGCTTGGAAAATAGGACTAAATCTCTCACTGATTTCCATTGTTTCTTCTGGAATATTTGGAAAGTTAATAGGCAATATAATTTATGCTTGGTCAGTTCACTTAAAAGGGGCTGTCTATGTAACCTCATTCATGCCATTTCAAATTGTTATTTCTGTTGGCTTAGGAGTTATATTCCTTGGTGATACTCTTCATATTGGAAGTATAATTGGAGCAACAATAATCTCAATTGGTCTATATGGTGTATTATGGGGCAAAGCAACAGAAGAGATAGAGGAAGATGTTGGTAGTTTGGAGTCACCATCTATAGAGAATGCACCATTGTTGCAAAGTTATAGAATTGAAACTTTTGAAAAGAAAACGAATATAAATGTTTAA 1092 0.3608 MTRRWSFYMDFLPVVVIIGFECIDMGLLTLFKAATLQGMNNHVFIAYAYVVGTSVLLPVTLFTRRSRVVPPLSFSIIWKSVLLGAIGCASQILGYIGINYSSPTLASAIANLVPAFTFMLAVTFRMEKLVAMSRSSNAKVIGSIISIAGAFVLTFYKGPSIMNSSSLHQPIDFLKSVNSSWAIAGIILTADYFLLSLWYILQVHILKEFPDELTLVLLYSITATIISIVVALLSVPDASAWKIGLNLSLISIVSSGIFGKLIGNIIYAWSVHLKGAVYVTSFMPFQIVISVGLGVIFLGDTLHIGSIIGATIISIGLYGVLWGKATEEIEEDVGSLESPSIENAPLLQSYRIETFEKKTNINV* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0472 363 Pfam EamA-like transporter family 25 154 IPR000620 GO:0016020|GO:0016021
Tpr2g0472 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 157 - -
Tpr2g0472 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 228 324 - -
Tpr2g0472 363 PANTHER WAT1-RELATED PROTEIN 5 350 - -
Tpr2g0472 363 PANTHER WAT1-RELATED PROTEIN 5 350 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0472 Tpr-Chr2 5487819 5492085 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0472 1 351 Nodulin-like Gene Family AT3G28050 47.802 7.69e-112 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0472 - - mtr:MTR_6g007740 552.747