Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0471 ATGACAAGAACATGGTCCTTTTACATGGATTTTCTGCCAGTTATAGTGATTATAGGAAATGAATGTATTGACATGGGTTTACTCACTTTGTTCAAAGCAGCAACACTTGAAGGAATGAACAATCATGTCTTTATTGCTTATGCTTATGCTGTTGGTACTTCTGTTCTTTTCCCTGTCACTCTTTTCACCAGAAGATTAAGAGTTCTTCCTCCACTCAGTTTCTCAATTATATGTAAAAGTATGCTTCTTGGGGCAATAGGATGCACATCTCAGATTCTGGGGTATATAAGTATAAATTACAGTTCTCCAACACTTGCTTCAGCAATTGCTAATCTTGTACCTGCTTTCACCTTCATGTTAGCTGTCACTTTCAGGATGGAAAAGTTAGCTGTCAAGAGTAGAAGTAGTAATGCTAAGGTAATAGGAAGCATAGTATCAATAGCAGGTGCTTTTGTGTTGACTTTCTATAAAGGACCATCCATCATGAATCCTTCGTCACTTCTTCAACCAATTGGATTTCTCAAGTCAGTGGATTCAAGTTGGGCCATTTCTGGCATTCTGCTGACTATTGACTATTTTCTGGTTTCACTTTTTTACATCTTACAGGTACATATCTTAAAAGAGTTCCCAGATGAACTAACTTTAGTCTTGTTATACTCCATAGCTGCCACCATCATATCAACAGTAGTAGCTTTGTTATCAGTTCCAAATTCAAGTGCTTGGAAAATAGGATTAAATCTCTCATTGATCTCCATTGTTTCTTCTGGAATTTTTGGAAAGTTGATAGGCAATATAGTTTATGCATGGGCAGTTCGTTTAAAAGGGGCTGTCTATGTAACTTCATTCAAGCCACTGCAAATTGTTATTTCTGTTTACTTGGGTGTTATATTCCTTGCTGATAGTCTTTATGTTGGAAGTATAATTGGAGCAACAATAGTCTCAATTGGTCTTTATGGTGTATTATGGGGAAAAGCATCAGAAGAGATAGAGGAAGATATCGGTATCTTGGAGTCACCATCTACAGAGAATGCACCTCTGTTGCCAAGTTATAGAACTTATCAAACTTTTGAAAAGAAAACAGATGGAAATGTTTAA 1095 0.3653 MTRTWSFYMDFLPVIVIIGNECIDMGLLTLFKAATLEGMNNHVFIAYAYAVGTSVLFPVTLFTRRLRVLPPLSFSIICKSMLLGAIGCTSQILGYISINYSSPTLASAIANLVPAFTFMLAVTFRMEKLAVKSRSSNAKVIGSIVSIAGAFVLTFYKGPSIMNPSSLLQPIGFLKSVDSSWAISGILLTIDYFLVSLFYILQVHILKEFPDELTLVLLYSIAATIISTVVALLSVPNSSAWKIGLNLSLISIVSSGIFGKLIGNIVYAWAVRLKGAVYVTSFKPLQIVISVYLGVIFLADSLYVGSIIGATIVSIGLYGVLWGKASEEIEEDIGILESPSTENAPLLPSYRTYQTFEKKTDGNV* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0471 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 157 - -
Tpr2g0471 364 Pfam EamA-like transporter family 25 154 IPR000620 GO:0016020|GO:0016021
Tpr2g0471 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 231 325 - -
Tpr2g0471 364 PANTHER WAT1-RELATED PROTEIN 5 350 - -
Tpr2g0471 364 PANTHER WAT1-RELATED PROTEIN 5 350 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0471 Tpr-Chr2 5479653 5487181 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0471 1 354 Nodulin-like Gene Family AT3G28050 47.838 1.98e-112 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0471 - - mtr:MTR_6g007740 543.117