Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0470 ATGGACAGAAGGTACTGTTACAAAGATTTGCTACCTTTTATGGTTCTTGTTGGCAATGAATGCATCATAACAGGAGTATACACTTTGTTCAAAGCAGCAACTTTGCAAGGAATGAGTAAATATGTCTTTGTTGCTTATTCTTATACTGTATCAACTATCTTCCTCTTTCCTGTGTATTTTTTTTATAGAAGATCAAGAGTGGTTCCTCAACTCCGTTTCTCCATCTTATTTAAAATTGCACTTCTTGGAGTCATAGGATGTTCAGCTCAGATTATGGGGTATGCTGGCATCAGTTACAGTTCTCCTACACTTTCCTCTGCAATTGGAAATCTAATTCCTGCTTTCACATTCATGTTAGCTGCCATTTGCAGGATGGAAAAGTTAGCTATAAAAAGTAGAACTACACAAGCTAAGGTTTTGGGAAGCATTATATCAATATCAGGTGCATTTATAGTGACTTTCTACAAAGGAAAATCAATTATCATTGCTCATATTTCCTCTTCCTTTTATCTTCAACACTCCTCAAATGGCATTCTTGCATCAGTAGATATAAATTGGTCCATTGGTGGCCTTTTGCTGACAGTATCCAATATACTACTTACCATATGGTTCATTGCTCAGGTTGAAATCATGAAGGAGTTTCCAGATGAACTAACTTTGGTCTTCTTTCACAACTTATTTGCAACCATTTTGGCTTTAGGTGTAGGTTTATTAGCAGAGACAAATAGTAGTCTTTGGAATATAAGACTAGACATATCACTGATCTCTATTGTCTGCACGGGAATATTTGGCAAGTTCCTGAGTAGTGCAGTATATGCTTGGGCAATACACTTAAAGGGTCCTGTATATGCAACAATGTTCAAGCCACTTTCAATTATTATTGCTGTTGTCATGGGTATGGTGTTCCTTGGTGATACTCTTCATATTGGAAGTATAATTGGAGCCACAGTAATCTCAATTGGTCTTTATGCTGTATTATGGGGAAAAACATCAGAAGATATAAAGAAGGATATTGTTGGTACCTTTGAGTCACCAGAGAATGCACCTCTGTTGCAAGGTTATAGAACTTATCAAACCTTTGAAAAGAAAACAGTTGCAAATGTTTAG 1107 0.364 MDRRYCYKDLLPFMVLVGNECIITGVYTLFKAATLQGMSKYVFVAYSYTVSTIFLFPVYFFYRRSRVVPQLRFSILFKIALLGVIGCSAQIMGYAGISYSSPTLSSAIGNLIPAFTFMLAAICRMEKLAIKSRTTQAKVLGSIISISGAFIVTFYKGKSIIIAHISSSFYLQHSSNGILASVDINWSIGGLLLTVSNILLTIWFIAQVEIMKEFPDELTLVFFHNLFATILALGVGLLAETNSSLWNIRLDISLISIVCTGIFGKFLSSAVYAWAIHLKGPVYATMFKPLSIIIAVVMGMVFLGDTLHIGSIIGATVISIGLYAVLWGKTSEDIKKDIVGTFESPENAPLLQGYRTYQTFEKKTVANV* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0470 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Tpr2g0470 368 Pfam EamA-like transporter family 189 326 IPR000620 GO:0016020|GO:0016021
Tpr2g0470 368 Pfam EamA-like transporter family 21 153 IPR000620 GO:0016020|GO:0016021
Tpr2g0470 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 330 - -
Tpr2g0470 368 PANTHER WAT1-RELATED PROTEIN 9 341 IPR030184 GO:0016021|GO:0022857
Tpr2g0470 368 PANTHER WAT1-RELATED PROTEIN 9 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0470 Tpr-Chr2 5475618 5479241 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0470 4 345 Nodulin-like Gene Family AT5G40240 47.661 6.00e-115 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0470 - - mtr:MTR_6g007760 512.301