Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0469 ATGGATAGACGATATTGTTACAAAGATTTGCTACCATTTGTGGTTCTTGTTGGCAATGAATGCATGATAACAGGAGTAAACACTTTGTTCAAAGCAGCAACTTTGCAAGGAATGAGTAAATATGTGTTTGTTACTTATTCTTATACTTTTGCAACTATCTTCTTCTTTTCTGTCTATTTTTTCTATAGATCAAGAGTGGTTCCTCAACTCAGTTTCTCCATCTTATCTAAAATTGCTCTTCTTGGAGTCATTGGAGGTTCAGCTCAGATTTTGGGGTATACTGGCATCAGTTACAGTTCTCCTACACTTTCCTCTGCAATTGGAAATCTCATTCCTGCTTTCACCTTCATTTTAGCTGCCATTTGCAGGATGGAAAAGCTAGCTATAAAAACTAGAACTACACAAGCTAAAGTCTTGGGAAGCATTATATCAATATCAGGTTTATTAGCAGAGACAAATAGTAGTCTTTGGAAGATAAGACTGGACATATCATTGATCTCTATTGTCTGCACCGGAATATTTGGCAAGTTCATGGGTAATGCAATATATGCTTGGGCAATACACTTAAAGGGTCCTGTATATGTAGCAATGTTCAAGCCGCTCTCAATTGTTATTGCTGTTGTCATGGGTATGGTGTTCCTCGGTGATACTCTTCATATTGGAAGTATAGTTGGAGCTACAATAATCTCAATTGGTCTTTATGCTGTATTATGGGGAAAAGCATCAGAAGAGATAGAGGAAGATGTTGGTACCTTGGAGTCACCATCTACGGAGAATGTAGCTCTGTTGCAAAGTTACAGAACTGATCAAACTTTTGAAAAGAAAACAGATAGGAATGTTTAA 843 0.3713 MDRRYCYKDLLPFVVLVGNECMITGVNTLFKAATLQGMSKYVFVTYSYTFATIFFFSVYFFYRSRVVPQLSFSILSKIALLGVIGGSAQILGYTGISYSSPTLSSAIGNLIPAFTFILAAICRMEKLAIKTRTTQAKVLGSIISISGLLAETNSSLWKIRLDISLISIVCTGIFGKFMGNAIYAWAIHLKGPVYVAMFKPLSIVIAVVMGMVFLGDTLHIGSIVGATIISIGLYAVLWGKASEEIEEDVGTLESPSTENVALLQSYRTDQTFEKKTDRNV* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0469 280 SUPERFAMILY Multidrug resistance efflux transporter EmrE 158 241 - -
Tpr2g0469 280 Pfam EamA-like transporter family 163 237 IPR000620 GO:0016020|GO:0016021
Tpr2g0469 280 Pfam EamA-like transporter family 22 148 IPR000620 GO:0016020|GO:0016021
Tpr2g0469 280 PANTHER WAT1-RELATED PROTEIN 144 266 - -
Tpr2g0469 280 PANTHER WAT1-RELATED PROTEIN 8 147 - -
Tpr2g0469 280 PANTHER WAT1-RELATED PROTEIN 144 266 IPR030184 GO:0016021|GO:0022857
Tpr2g0469 280 PANTHER WAT1-RELATED PROTEIN 8 147 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0469 Tpr-Chr2 5470535 5473898 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0469 148 270 Nodulin-like Gene Family AT3G28050 48.529 1.76e-38 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0469 - - nau:109218179 254.218