Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0468 ATGGACAGAACCTACTGTTACAAAGATTTGCTACCTTTTGTGATTCTTGTTGTCAATGAATGCATGACAACAGGAGTAAACACTTTGTTCAAAGCAGCAACTTTGCAAGGAATGAGTAAATATGTGTTTGTTACTTATTCTTATACTTTTGCAACTATCTTCTTCTTTCCTGTCTATTTCTTCTATAGAAGATCAAGAGTGGTTCCTCAACTCAGTTTCAACATCTTATTTAAAATTGCTATTCTTGCAGTAATAGGGATGGAAAAGCTAGCTATAAAACGTAGAACTACACAAGCTAAGATTTGGGGAAGCATTATATCAATATCAGGTGCATTTATAGTGACTTTCTACAAAGGAAAATCAATTGTCATTGCTCATAATTCCCCCTCCTTTCATATGCAACTCTCAAATGACATTCTTACATCAGTTGATACAAATTGGGCCATTGGTGCCCTTTTTCTGACAGTATCAAAAATACTATTTACCATATGGTTCATTGTTCAGGCGGAAATCATGAAGGAGATTCAAGATGCACTAACTTCGGTCTTCTTTCACAACTTATTTGCAAGCATTTTGGCTTTAGGTGTAGGTTTAGTAGCTGAGACAAATAGGAGTCTATGGAAAATAACACTGGACATATCACTGATCTCTACTGTCTGCACTGCAATATTTGGCAAGTTCCTAGGTAGTGCAATATATGCTTGGGCAATACACTTAAAGGGTCCTGTATATGTAACATTGTTCAAGCCACTCTCAATTGTTATTGCTGTTGTTATGGGGATTCTTTTCCTTGGTGATACTCTTCATGTTGGAAGTATAATTGGAGCCACAATAATATCAATTGGATTTTATACTGTAATGTGGGGAAAAGCAACTGAAGAGAAGGAAGATGGTTTTGGTAGCAAGGAATCACAACCTATTGAGAATGTTCCTCTCTTGCAAGATTATCAAACTGTCAAATCATAA 966 0.3592 MDRTYCYKDLLPFVILVVNECMTTGVNTLFKAATLQGMSKYVFVTYSYTFATIFFFPVYFFYRRSRVVPQLSFNILFKIAILAVIGMEKLAIKRRTTQAKIWGSIISISGAFIVTFYKGKSIVIAHNSPSFHMQLSNDILTSVDTNWAIGALFLTVSKILFTIWFIVQAEIMKEIQDALTSVFFHNLFASILALGVGLVAETNRSLWKITLDISLISTVCTAIFGKFLGSAIYAWAIHLKGPVYVTLFKPLSIVIAVVMGILFLGDTLHVGSIIGATIISIGFYTVMWGKATEEKEDGFGSKESQPIENVPLLQDYQTVKS* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0468 321 PANTHER WAT1-RELATED PROTEIN 85 309 - -
Tpr2g0468 321 PANTHER WAT1-RELATED PROTEIN 8 86 - -
Tpr2g0468 321 SUPERFAMILY Multidrug resistance efflux transporter EmrE 211 291 - -
Tpr2g0468 321 PANTHER WAT1-RELATED PROTEIN 85 309 IPR030184 GO:0016021|GO:0022857
Tpr2g0468 321 PANTHER WAT1-RELATED PROTEIN 8 86 IPR030184 GO:0016021|GO:0022857
Tpr2g0468 321 Pfam EamA-like transporter family 149 287 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0468 Tpr-Chr2 5465536 5469802 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0468 1 318 Nodulin-like Gene Family AT3G28050 39.024 6.15e-83 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0468 - - gmx:100811686 421.009