Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0452 ATGTATGGGTTCGGTGGTGAGAAGTGGAAACACAATCGGCACATGTGGCCTGTTGTTACTTCTAACGCGACCACTGTAGTCACCGTTTCTTCACCGTCTCAATTTATATGCAAAGATGGACGCAAGATTCGTGTTGGTGACTGTGCACTTTTCAAACCTCCCCAGGACTCACCTCCTTTTATCGGAATAATTCGCAAGTTAACATTCGATAAAGAAGAAAATCCTAGTTTAGAAGTGAATTGGTTTTACCGGCCTGCTGATTTGAAGCTCAATAAAGGGATTGTAGTGGAAGCTGCACCAAACGAAGTCTTCTACTCCTTTCACAAGGATGAGATACATGCTGCATCATTACTCCATCCTTGTAAAGTCGCATTTCTCCGTAAAAGTGTTGAACTACCTTCAGGGATATCCGCATTTGTTTGTAGGCGAGTTTACGACATTGACAACAATTGTTTACGGTGGCTAACTGATAAGGATTATATTAATGAACAGCAGGAAGAAGTTTACAAGCTATTAGATAAGACAAAACTAGAAATGCATGGGGCTGTGCAGTCAGGAGGCCGTTCTCCAAAACCCTTGAATGGTCCAACGTCAACACAGTCATTGAAATCTAGTTCTGATAACATTCAAAGTAGTTCTTCCTTTGGTGTACCGGGTAAAGGAAAAAAGAGAGAAAGAGGTGATCAGGGATCTGATTCATCCAAAAAAGAGCGATTATTTAAGGTAGAAGATGGAGATTCTGGTCAATTTAGACCGGAGAGCATGCTAAGGTCTGAGATTGCTAAAATCACTGATAAAGGCGGGTTTGTGGACTTTGAAGGAGTTGAAAAGTTTATACAGCTCATGCAACCTGACAGTGCTGATAAAAAAATAGATTTGGCTGGTCGAATTATGCTTGTTGATGTAATATCTCTCACGGAACGGAATGAATGTCTTGGCTGGTTCGTACAGCTCCGGGGTTTGCCTGTGTTAGATGAATGGCTCCAGGAAGTCCATAAGGGCAAAATTGGCGATGGCAATGTGGATAAGTCTGAAGAATTTTTGTTAGCTTTACTTCGTGCGTTGGATAAGCTTCCTGTGAATCTTCATGCACTACAAACCTGTAATGTTGGAAAATCTGTTAATAATTTGCGTAGCCACAGAAATTCTGAAATTCAGAGGAAAGCCAGGAGTTTGGTAGACACATGGAAGAAGCGTGTTGAAGCTGAAATGAATATGACAGATTCAAAACCAGGTTCAACCCGTGCTGTTTCTTGGCCCGCAAAGCAATCACAGTCAGATGTTTCTCACTCCGGTAATAGGAAAAGTGGAGGATCCTCAGAGCATGTTGCAAAGAGCTCTGCTATTCAACCTTCAACATCCAAAAATTCCCAATCTAAGCTTAATTCTGGAGAAGTAGTATCGAAGTTCACTTCATCCCCTGGCTCAACTAAATCGATGACTGCCTCAGTATGCAGCAACTCGAAAGATCAAAATGTTAAACTCATTGTTGGTGCAACAACATCAGATCTACCTCTGACACCTATCAAGGAGGAGAGGAGCAGCAGTTCTAGTCAATCTCAAAACAACAGCAGATCTTGTTCAAGTGAATATACGAAGACTATTGGTTCTTGCCGGGAAGATGCAAAGGGCTCCACAGCAGGGTCAATGAGCGTGGGCAAAGTTCATGGTGGTGCATCTCGGACTCGGAAGTCGAGTAATGGTGTACATGGTGCCGGTGTTGCTGTAGTTCAGAAGGATCATAGCTCTGCTAAGTTGAGAAATTCACCTTCTGATAAAATTTCCCCGACCCGTATGTCCCATGAAAAACCATCTGATCAGCCCCTTACCGATCAAGGGCACAATCAGCGACTGATTGTCAGGTTGCCAAACACTGGTCGCAGTCCATCAAGGGGAGCTAGCGGGGGCAATTTTGAAGAACCTGCAATTGCATGTGGCAAAACATCACCTCAATCTGAAAAAAATGAGAATCAGGACAGGAGAGTTAAAGCTAAAGCTGATTGTTTGCAGACCCATGTGTCAAATGTGATAAATGATGCACCCAATGATAATGAAACAACTTGTTGTGATGAAGCTAAGGGCTCTCCGCCAGTGGATGAGCGGTGCAGGGCTAGTGAAGAAGGGGATAAAGCAGCAGAAATGCCAAAAACAACCTGTTCTTCAACTGGATTTGTTTCCAGATCTGGGCTTACATATGATGCTTCTTTAAGCCCCATGAATGCGTTGGTCGAGAGCTGTGTTAAATTTTCTGAAGCAAGTTCCTCTGTTTCTCCGGGAGATGATGGGATGAATCTGCTTGCTTCCGTGGCTGCAGGAGAAATATCTAGATCTGAAAATGTCTCACCTCTTCCTTCACCCGAGAGGAAGTCTCCTGCAGCTGATGAATCAAGCACAGGGAATGATTCCAAATTAAGACGTTCTTTTGAAGCAGCTGCTCGTACTATTGGACAGTCTGATGGTGGGGCTACTGGAGAACATCCTCGGAATAATGTGGAGTCATTGCAATTCAAAAATGATTCTAGGCATCCTGTGACGACAGTATCGCATGATGTTTCAGGTGGTGAAGCCATTTCATCTAGTCATCTGGAGAAAACTGGTGATGGCAAAACTCAAATAAATTTCTCTACTTCAGATGCAATACAGAATGTCGAAGGTCCGTGCTTACGGCCTGACATAAAAGAGGATACTTCTGAAGCTATGTTTCCAGCTAGAAAGGAGACTCATGCAGAAACCGGAGGAGCAGAGCGTTTTCAGGAGCAGAGGGAATTGGGAACTCAACGGGCTAAAAACAGCAGTAGTTCAGGCTTTACGTTAAAGTCAAAGACTTCCTCTTTTGACGATGATCAGAAGATTGCTAACATGGATGGTGGCACCGCGGAGCACGAGAATGGAAATGAACAAGGGAAAAAATTCCCCGGGTTATCTTCAGGTTTAGATAGTAAGAGCCAGAACAGTGCAGAGAAAGTGACAGGTATTCTTAGGCCTGTACAGAAAGGCTCTCCAGTTACAGATACGTGCGAGTCCATGGATTTAAAAAGGGAGGATGTCGTGCCGCCTGCTCCTGGTAATGCTTTGTCGGTATCCAGGGATGATAATGCTAATCATGTGATGCCAGCTGAGTTTGAGCCTGATGAAAAACGAATGGATCTGGATTCAGCAGTTTCAGATGGTGTTATTGGCTCTGGTTCATCAGTTCTCCCAGATTTACCAATTACTTCTGTAAAAGAGAACGAAGTTCCCAAAACATGTGATTCTAATCTAGAAAGAAAAAAATCTGTAGACACTGCAGAGTTGAATGCCGGCAATGCTATTCCATCCCCAATTGCTAGCGTTTCTGATGCAGCTGTAAAACTGGACTTTGATTTAAATGAGGGATACCCCGTTGAAGATGTAGCTCAAGCGGACATTGTTAGAACAGAAGAAGCTACCAGTTCATCTGCAGTCCATGTTCCTTGCCCGTTGCCTTTTCCCATTCCGTCCATCTCCGGTTCATTCCATGCTTCAATTACAGTGGCTTCTGCTGCTAAAGGGCCAGTTGTTCCACCAGAAAATCCATTGCGGAGTAAGGGGGAACTTGGCTGGAAAGGCTCAGCTGCTACAAGTGCATTCCGACCAGCTGAACCTAGGAAAAATGCTGAAATGCCATTAAATACTGTTGATATTCCTTCCGTTGACGCCACTTCAGTTAAAAAAGGCCGCGCTCCTTTAGATTTTGATTTAAATGTTGCCGATGAAGTAAGTTTCGAGGATGTAGCTTACCGGGGTGCCTTACCGTCTGGAACACATGACCGCAGCACCGTGGGACTTGATCTTGATCTAAACAGGTTAGATGAGACTCCTGAAGCTGCATCTTTCTCTATGGGTAAAGTGGATATTCCTTCTCTACCATGTAAACAACCTTCATTGTCCAGTGGGTTATCTAATGGTGGAAGTGTCTCAAGAGACTTTGATTTAAATAATGGGCCAGGCCTTGATGAAGTTAGTACTGAAGTCCCAGCCCGTAGTCTGCAGATGAAAAGTGCTGTGCCTTTTTCAGGTTCTGTTCATGGTTCGAGAACAACTAATGCTGAATTTGGGAATTATTCTTCATGGTTTCCTCAGGGCAGTTCGTATTCTGCGATTACTGTCCCGCCACTTCTGCCTGGTAGGGGGGAGCAGAGTTATGTTGGTGGTTCTGGGGCACAGCGGATCATAGGCTCCACTGGTAGCACACCTTTTAATCCTGAAATGTACAGAGGGCCAGTACTTTCATCCTCTCCAGCTATTGCATATCCACCTACAACCCCGTTTCCATATCCAGGATTTCCATTTGAAACAAATTTTCCATTATCTTCAAACACTTTTTCTGGTTGTTCAACGCCGTTTATGGATTCATCAACTGTTGGTGGGCTTTGCTTTCCTACTATGCCCTCACAGCCGGTTGGGCCTGGTGGTGTTGTCTCGTCCGCATATCCCCGCCCATATGTTATGAGCCTTCCAGGTGGGACAAGTAATGTGATTCCCGACAGCAGAAAATGGGGAAGTCAGAGTCTGGATCTTAATTCAGGCCCTGGTGGTGCAGATACCGAGCGCAGAGATGACAGGTTGCCTTCAGGATTGAGACAGATGCCAGTCCCCAGTCCACAAGCCTTGATGGAGGATCACTTGAAGATGTTTCAAATGGCCGGTGCATTAAAAAGAAAGGAACCTGATGGTGGTTGGGATGGAACTGATAGATTCAGTTACAAACATCCCTCATGGCAGCAGTAG 4749 0.4449 MYGFGGEKWKHNRHMWPVVTSNATTVVTVSSPSQFICKDGRKIRVGDCALFKPPQDSPPFIGIIRKLTFDKEENPSLEVNWFYRPADLKLNKGIVVEAAPNEVFYSFHKDEIHAASLLHPCKVAFLRKSVELPSGISAFVCRRVYDIDNNCLRWLTDKDYINEQQEEVYKLLDKTKLEMHGAVQSGGRSPKPLNGPTSTQSLKSSSDNIQSSSSFGVPGKGKKRERGDQGSDSSKKERLFKVEDGDSGQFRPESMLRSEIAKITDKGGFVDFEGVEKFIQLMQPDSADKKIDLAGRIMLVDVISLTERNECLGWFVQLRGLPVLDEWLQEVHKGKIGDGNVDKSEEFLLALLRALDKLPVNLHALQTCNVGKSVNNLRSHRNSEIQRKARSLVDTWKKRVEAEMNMTDSKPGSTRAVSWPAKQSQSDVSHSGNRKSGGSSEHVAKSSAIQPSTSKNSQSKLNSGEVVSKFTSSPGSTKSMTASVCSNSKDQNVKLIVGATTSDLPLTPIKEERSSSSSQSQNNSRSCSSEYTKTIGSCREDAKGSTAGSMSVGKVHGGASRTRKSSNGVHGAGVAVVQKDHSSAKLRNSPSDKISPTRMSHEKPSDQPLTDQGHNQRLIVRLPNTGRSPSRGASGGNFEEPAIACGKTSPQSEKNENQDRRVKAKADCLQTHVSNVINDAPNDNETTCCDEAKGSPPVDERCRASEEGDKAAEMPKTTCSSTGFVSRSGLTYDASLSPMNALVESCVKFSEASSSVSPGDDGMNLLASVAAGEISRSENVSPLPSPERKSPAADESSTGNDSKLRRSFEAAARTIGQSDGGATGEHPRNNVESLQFKNDSRHPVTTVSHDVSGGEAISSSHLEKTGDGKTQINFSTSDAIQNVEGPCLRPDIKEDTSEAMFPARKETHAETGGAERFQEQRELGTQRAKNSSSSGFTLKSKTSSFDDDQKIANMDGGTAEHENGNEQGKKFPGLSSGLDSKSQNSAEKVTGILRPVQKGSPVTDTCESMDLKREDVVPPAPGNALSVSRDDNANHVMPAEFEPDEKRMDLDSAVSDGVIGSGSSVLPDLPITSVKENEVPKTCDSNLERKKSVDTAELNAGNAIPSPIASVSDAAVKLDFDLNEGYPVEDVAQADIVRTEEATSSSAVHVPCPLPFPIPSISGSFHASITVASAAKGPVVPPENPLRSKGELGWKGSAATSAFRPAEPRKNAEMPLNTVDIPSVDATSVKKGRAPLDFDLNVADEVSFEDVAYRGALPSGTHDRSTVGLDLDLNRLDETPEAASFSMGKVDIPSLPCKQPSLSSGLSNGGSVSRDFDLNNGPGLDEVSTEVPARSLQMKSAVPFSGSVHGSRTTNAEFGNYSSWFPQGSSYSAITVPPLLPGRGEQSYVGGSGAQRIIGSTGSTPFNPEMYRGPVLSSSPAIAYPPTTPFPYPGFPFETNFPLSSNTFSGCSTPFMDSSTVGGLCFPTMPSQPVGPGGVVSSAYPRPYVMSLPGGTSNVIPDSRKWGSQSLDLNSGPGGADTERRDDRLPSGLRQMPVPSPQALMEDHLKMFQMAGALKRKEPDGGWDGTDRFSYKHPSWQQ* 1583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0452 1582 MobiDBLite consensus disorder prediction 924 942 - -
Tpr2g0452 1582 MobiDBLite consensus disorder prediction 407 486 - -
Tpr2g0452 1582 MobiDBLite consensus disorder prediction 1504 1533 - -
Tpr2g0452 1582 MobiDBLite consensus disorder prediction 507 529 - -
Tpr2g0452 1582 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 275 404 IPR035441 -
Tpr2g0452 1582 MobiDBLite consensus disorder prediction 775 803 - -
Tpr2g0452 1582 PANTHER BAH DOMAIN-CONTAINING PROTEIN 1 1581 - -
Tpr2g0452 1582 MobiDBLite consensus disorder prediction 1560 1582 - -
Tpr2g0452 1582 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 311 413 IPR035441 -
Tpr2g0452 1582 SMART TFS2_5 328 402 IPR003617 GO:0005634
Tpr2g0452 1582 MobiDBLite consensus disorder prediction 905 923 - -
Tpr2g0452 1582 ProSiteProfiles BAH domain profile. 41 156 IPR001025 GO:0003682
Tpr2g0452 1582 MobiDBLite consensus disorder prediction 609 632 - -
Tpr2g0452 1582 MobiDBLite consensus disorder prediction 190 217 - -
Tpr2g0452 1582 MobiDBLite consensus disorder prediction 402 486 - -
Tpr2g0452 1582 MobiDBLite consensus disorder prediction 905 1035 - -
Tpr2g0452 1582 MobiDBLite consensus disorder prediction 504 529 - -
Tpr2g0452 1582 MobiDBLite consensus disorder prediction 219 248 - -
Tpr2g0452 1582 Gene3D - 25 248 IPR043151 -
Tpr2g0452 1582 Pfam BAH domain 42 147 IPR001025 GO:0003682
Tpr2g0452 1582 MobiDBLite consensus disorder prediction 541 661 - -
Tpr2g0452 1582 Pfam TFIIS helical bundle-like domain 351 400 IPR017923 -
Tpr2g0452 1582 ProSiteProfiles TFIIS N-terminal domain profile. 322 403 IPR017923 -
Tpr2g0452 1582 MobiDBLite consensus disorder prediction 976 990 - -
Tpr2g0452 1582 MobiDBLite consensus disorder prediction 180 248 - -
Tpr2g0452 1582 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1581 - -
Tpr2g0452 1582 CDD TFIIS_I 332 401 - -
Tpr2g0452 1582 SMART BAH_4 41 156 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0452 Tpr-Chr2 5283280 5290753 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Tpr2g0452 BAH 8.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0452 - - gmx:112998769 2198.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0452 2 5283280 5290753 Tpr2g0452 2 5283280 5290753 ECH