Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0430 ATGGCATCAGGTGGAACAGAAGCTTTTCCAGATTTAGGCAAACACTGCCAACATCTTGATTGTCACCAGCTCGATTTCCTTCCTTTCACATGTGATGGCTGCACACAGGTATTCTGTGTAGAACATAGATCCTACAAGGCTCATGAATGTCCAAAACACGACCACAACAGCAGAAAAGTGGTTGTTTGCGAAGAATGTTCCATGTCCATGGAGATCACAAACAACACCGGAGAAAACGAAGAAACAATCTTAAAAAAGCACCACACTTCAGGGAAGTGTGATCCTAGCAAGAAGAAGAAACCAACTTGCCCAGTGAAGCGTTGCAAAGAGATTTTGACGTTTTCTAACACGAGTATTTGTAAAACTTGCCACATTAAGGTGTGTCTCAAACACCGTTTTGCAGCCGACCATGCTTGTGGTAAAAGAGATTCATCTTCCTCCTTAACAAATGCTGCTGGAAATGCAAGATGGAATAATAAGTTTATGGCTGCTTTGGCTTCAAGGAATAATCAAGATTGTGCCAAAAAAGCTGGAAATCGTTCAACTACTTCTCCTTCTGTTAAGGCTTATTGA 573 0.4154 MASGGTEAFPDLGKHCQHLDCHQLDFLPFTCDGCTQVFCVEHRSYKAHECPKHDHNSRKVVVCEECSMSMEITNNTGENEETILKKHHTSGKCDPSKKKKPTCPVKRCKEILTFSNTSICKTCHIKVCLKHRFAADHACGKRDSSSSLTNAAGNARWNNKFMAALASRNNQDCAKKAGNRSTTSPSVKAY* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0430 190 SUPERFAMILY AN1-like Zinc finger 6 59 IPR035896 -
Tpr2g0430 190 Gene3D - 2 70 IPR035896 -
Tpr2g0430 190 Gene3D - 77 160 IPR035896 -
Tpr2g0430 190 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 6 180 - -
Tpr2g0430 190 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 6 180 - -
Tpr2g0430 190 ProSiteProfiles Zinc finger AN1-type profile. 97 147 IPR000058 GO:0008270
Tpr2g0430 190 SUPERFAMILY AN1-like Zinc finger 95 142 IPR035896 -
Tpr2g0430 190 Pfam AN1-like Zinc finger 103 142 IPR000058 GO:0008270
Tpr2g0430 190 Pfam AN1-like Zinc finger 16 53 IPR000058 GO:0008270
Tpr2g0430 190 ProSiteProfiles Zinc finger AN1-type profile. 10 58 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0430 Tpr-Chr2 5012474 5013712 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0430 1 173 C2H2 Transcription Factor Family AT3G28210 60.920 1.89e-75 223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0430 2 5012474 5013712 Tpr2g0430 2 5012474 5013712 ECH