Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0425 ATGAAAAATACAACACTAACCGCATCTAGCATTATGGATTTGGTTCCAAGAAACCTAATAAACACCACAACAATTGTACTCTTTCCTCTAATTTCCATATGTTTGTTTCTATTTGCATTCTCAAAAGTTGCTCATAGGAAAAACAAAGAGGCACCAATAGCCGATGGAGCATGGCCAATACTTGGTCACCTCTCACTTTTTAGTGGCACACAATCACCCCATAGGGTCTTAGGCACCTTAGCTGATAAATATGGACCAATATTCACCATCAAGCTTGGTTCAAAACTTGCTTTAGTTATCAACAATTGGGAAATGGCCAAGGAATGTTTCACAACAAATGACATGGCCGTTTCGTCTCGTCCCAAGCTTGTTGCAACTGAACATTTGGCCTATAATGGAGCTATGTTTGGTTTTGCACCATATGGTCCTTATTGGCGTGAAATTCGCAAGATTACAACCTTAGAGGTCTTCTCAAATCGCAGAGTAGAACAACAACAACATGTTCGTGTTTCTGAAGTTCGAGCATCGATTAAAGAACTCTTTGATGTTTGGTCTAGCAAAAAGAACGAGACATGTTCATCAAATTATGTGTTAGTAAACATGGATGAATGGTTTACACATTTAACATTCAACGCGGTTCTTCGAATGGTTGTTGGGAAGAGATATTTTGGTGTAAAAACTATTGAAGAGGAAGAAAAAGCTCAAAGATGTGTGAAAGCTTTGAAAGAGTTGATGCATTTGTTTGGGATAATCACGGTGGGAGATGTTATTCCTTGTTTGAAATTTTTTGATTTTGGTGGTCATGTGAAGGCCATGAAAGAAACTTCTAAAGAATTGGACAAAATTTTAGATGAGTGGTTGAATGAGCATCGTCATAAAAGGACTTTAGATGAAATTGTTGATCATCAAGCTCAAGACATTATGGATGTGTTGATTTCATTACTTGATGGAAGAACCATTGAAGGGTTTGATTCTGATACCATCATCAAAGCCACAGTATTGACACTATTTGCTGGAGGAAATGACACAACTGGTGTTACTCTTACGTGGGCACTATGTTTGCTATTGAAAAATCCGCTAGTAATGGAAAAAGCCAAAAAAGAACTTGACATCCAAGTTGGTAAAGAAAGATGTGTAAATGAGTCAGATATCGGTAAATTGATATACCTTCAAGCTATAGTAAAAGAAACACTAAGATTATATCCACCAGCACCTCTCTCAGGACATCATGAGTTCTCAGAGAACTGTACTTTAGGTGGTTACCATGTTAAAAAGGGAACTCGATTAATCACAAATCTATGGAAGATACATAATGATTCTAGTGTTTGGTCTAACCCACTAGAGTTCAAACCAGAAAGGTTCCTTACAACTCACAAAGATGTTGATGTTAGGGGTAAACATTTTGAGCTATTACCATTTGGAAGTGGTAGAAGGATGTGTCCTGGAATATCATTTGGACTTCAAATGTTGCATTTTTCTCTAGCTAGTGTTTTGCATTCCTTTGATATCTTAAATCCAACATCTGAACTTGTTGATATGAATGAAGTCTTTGGATTAACAAATACCAAAGCTACTCCACTTCAGATTCTCATTAAACCGCGTTTGTCTCTCAATTGTTATGAAAACGTGTAA 1632 0.3695 MKNTTLTASSIMDLVPRNLINTTTIVLFPLISICLFLFAFSKVAHRKNKEAPIADGAWPILGHLSLFSGTQSPHRVLGTLADKYGPIFTIKLGSKLALVINNWEMAKECFTTNDMAVSSRPKLVATEHLAYNGAMFGFAPYGPYWREIRKITTLEVFSNRRVEQQQHVRVSEVRASIKELFDVWSSKKNETCSSNYVLVNMDEWFTHLTFNAVLRMVVGKRYFGVKTIEEEEKAQRCVKALKELMHLFGIITVGDVIPCLKFFDFGGHVKAMKETSKELDKILDEWLNEHRHKRTLDEIVDHQAQDIMDVLISLLDGRTIEGFDSDTIIKATVLTLFAGGNDTTGVTLTWALCLLLKNPLVMEKAKKELDIQVGKERCVNESDIGKLIYLQAIVKETLRLYPPAPLSGHHEFSENCTLGGYHVKKGTRLITNLWKIHNDSSVWSNPLEFKPERFLTTHKDVDVRGKHFELLPFGSGRRMCPGISFGLQMLHFSLASVLHSFDILNPTSELVDMNEVFGLTNTKATPLQILIKPRLSLNCYENV* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0425 543 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 473 482 IPR017972 GO:0005506|GO:0016705
Tpr2g0425 543 Pfam Cytochrome P450 57 516 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g0425 543 PRINTS E-class P450 group I signature 81 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g0425 543 PRINTS E-class P450 group I signature 105 126 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g0425 543 PRINTS E-class P450 group I signature 208 226 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g0425 543 PRINTS E-class P450 group I signature 328 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g0425 543 PRINTS E-class P450 group I signature 348 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g0425 543 PRINTS E-class P450 group I signature 391 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g0425 543 PRINTS E-class P450 group I signature 432 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g0425 543 PRINTS E-class P450 group I signature 470 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g0425 543 PRINTS E-class P450 group I signature 480 503 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g0425 543 Gene3D Cytochrome P450 38 535 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g0425 543 PANTHER CYTOCHROME P450 82A2 12 541 - -
Tpr2g0425 543 PANTHER CYTOCHROME P450 82C3-RELATED 12 541 - -
Tpr2g0425 543 Coils Coil 269 289 - -
Tpr2g0425 543 SUPERFAMILY Cytochrome P450 57 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g0425 543 PRINTS P450 superfamily signature 339 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g0425 543 PRINTS P450 superfamily signature 392 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g0425 543 PRINTS P450 superfamily signature 471 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0425 Tpr-Chr2 4946180 4948915 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0425 20 535 Cytochrome P450 AT4G31940 47.801 4.89e-176 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0425 - - gmx:100805047 762.296