Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0424 ATGTCTCTGCAATCACCTTCATCTTCCTCTTCATTTCCCAATGAATATTTCAATTACCAGGCCTTCCTCAATTTCAGGGGCATTGACACTCGGTATGGTTTTACTAATAATCTCTACAATGCTCTTAAAGACAAGGGAATCCACACCTTTATTGATTACAATGATCTTCAGAGAGGAGATGAAATCACCCCAACACTCATCAAAGCCATTAATGAGTCTAGAATTTATATTCCTATATTTTCTATCAATTATGCTTCTTCTTCATTTTGTTTGGATGAACTTGTCCACATCATGTGTGGCTTCAAAGAAAAGGGTCGCCTTGTTCTTCCAGTTTTCTACGGTGTGGATCCTTCTGATGTGCGGCATCAGAAAGGCAGTTGTGGTAAAGCACTTGCCGAGCACGAAAAGAAGTTCCAAAATAACGAGAAAAACATGGAGCGATTGTGTCGATGGAAGATAGCTCTTAACCAAGCTGCTAACATTGCTGGCTACCATTTCAATATTGGATCAGACATGAATGAATATGAACACACGCTTATTGGAAAAATAGTTAAAGTTGTTTCCAATAAGATCAATCGAGCTCCTTTATATGTTGTCGATTACCCTGTTGGACTCAAGTCTCGAGTAAGTAACGTGAACTCACTTCTGAATGAGGCTTGTAGTGATGAAGTTTGCATGATTGGGATTCATGGAACAGGAGGAATTGGTAAATCAACACTTGCTCGAGCAGTTTATAATTTTATTGCTGATCAATTTGAGTGTTTGTGTTTCCTAGAAAATGTGAGAGAAAATTCAGCAAAACATCTCCAAGAGGAACTCCTTTACAAAACAATCGGATTGAAAGTGAAGATAGGAGGTGTCAATGAAGGAATTGGAATCATTAAAGAACGGCTACGTCGAAAGAGGGTCTTATTGATTCTCGATGACGTTGACAAGTTGAAGCAGCTAAAATTTTTGGCCGGAGGATTTGATTGGTTTGGTCGTAACAGCAGAGTCATCATTACCACTCGAGACAAAAGTTTGTTAACATGTCATGGGATTGAAAGAATATATGAAGTAGAAGGCTTAAATTGTGGTGAATCTCTTGAATTGTTTAAGCAGGTGGCTTTTAAAACTAAGAAAGTTGATTCAATTAATGATGATATTGTCAACCGTGCAATTAGTTATGCTTCTGGCCTTCCATTAGCTATAGATGTCATAGGTTCCAATTTGGCAGGAACGCCTATAGCAGAATGGGAATCTACATTAGATAAATATAAAAGGATTCCTCCTCATGATATCCAAAATATACTAAAAGTTAGCTTTGATGGTTTGGATGAAGAACAGAAAAATCTCTTTCTAGATATTGCATGTTTCTCTAAATGGTTTCATTTGGGACAAATTCGTGCTAATTACGATCATTGCATAAAACATGATGTTGGAGTGTTGGTTGATAAATCTCTCATAAAGATTCATCAATTTGGTGATGTGATATTACATGACTTGATAGAGCATATGGGTAAAGAAATTGTTCGAAAAGAATCACCCGATCATCCTGAAAAACGCTCTAGATTGTGGTTTCACAAAGATATAGTTGATGTTTTAGAACAAAACAAGGGATCTAGTAAAACTAAAATGATATATCTGGATTACCCCTCAAAGGAAGTCGTAATAAATTGGAATGGAGAAGCCTTCAAGAAGATGACAAATCTAAAAACACTTGTCATTAAAAATGCTAATTTTTCCGAAGGGTCCCGTCATTTTCCAAATAGTTTGAGAGTACTTGAATGGGAAAAATATCCTTCAATACCATTTAGTATTTTGAACAAGAAATTTGAGAATATGAAAGTTTTGAACTTTGACAACTGTGAATATTTAACAGAGATATCAAATGTCTCCGGTCTCCCAAATTTAGAGGAAATTTCATTTGAAAATTGTGTGAATTTAACTACAATTGACAACTCAATTGGGTTTCTGAGCAAACTTGAATTATTGAATGCTGAAGGTTGCACGAAGCTTAGGAGTTTTCCACCCTTGAAATTACCTTCTCTTAAATATCTGAATTTTACGGATTGTGAGAGTCTCCAGAATTTTCCAGAAATATTAGACAAGATCGAAACACTAGAAAATATTAATATTTATGGAACTTCCATACAAGAGATTCCAGTTTCAATTCAAAATCTAATTGGGCTTGTTTCACTAAATTTTGATACAAGTGGAAAGCTAATGTTCCCTAGCATTTGCAACATGCCAAAAGTGGAGGTTGTTCGCCTCAAAGGAATTAGCAACCTCTCATTATTTCTTCCGATGGCTATCATGCGGTTTGCTAATATGCAAGTTCTAAACCTATCTGGTAGCAATATCAGAGTTCTTCCAGAATGCCTTAAAGAATGTACCTCTCTTCATCATCTTATATTAGATTATTGCTATTCTCTTGAGGTTATTTCTGCAATTCCGCCAAATCTACAAAGATTGTCAGCAATAGACTGCAAATCATTGAGTAAAAGCATGTTACTGAATAAGAAATTGCATGAGTCTGGAAGAACCATCGAGTTTTGTTTCCCACCAGCAGAAGGTGAGATGATTCCGGAGTGGTTTAATCACCAAACTAGAGGAACAACCGACAAGTCAGGAACAACGTTTCCTTTCTGGTTTCGTAACAAGTTGCCGTCCATAATGATCTTCTTCTCAACTAATTCGAAGATGGAGTATCTTGGAGAATCATCTTCTGTATTGTCATTCAATCTGTTCATCAATGACTTTAAAAGGAATTTTAATGACATCCAAGACAAACTGTTTCAACATGGGTGGTTGCCAAGTCATACATATCTTTTTAATCTGCCTATGCAACAAAAGATTGAAATTCATGATATCTTGCTGGATTCATCCCAGCCGAAACTAATGCCTACACTGGATGAAGCATTTGAAAAAAATGAATGGATCCATGCAGAAATTAAGTTTTGGTCTACGGCTACATTGCCTTTGTATTTCGTGGAGGAAAACAATGCGGACCATATTCGGTTCACCAATCCTTGTAGAAAGAGAAAATTAGATGAACTGGAACATATATATCAAGATACTTCACTATCACAATCCCGGCCACTTCTGAAAAATCAAAGATTGTTGGATGTCGAAGAAGTTTTAGATACAGAACTTGTGGAAAAAGAACTGCAACACGGGATGAACAAGCTAAGACATGATACAAAGTCTTGCGAATACGAGTTTGGTGGTAATTCTCCAAATAAAATCAAGATGGATTATTTGAAATTGTTCAAATGGGCAAGGTGTGCTGCTCCATATATCAGTCACTCCAAATCAATCATCATCGTGTTCTTGTGTGTCATCATGTGTGTGATTTTATTTCTCTTCAAAGAAAAAACCACTATGCTTAGTTTGGGGGAACTAACTTGTCCGACCTGA 3399 0.3636 MSLQSPSSSSSFPNEYFNYQAFLNFRGIDTRYGFTNNLYNALKDKGIHTFIDYNDLQRGDEITPTLIKAINESRIYIPIFSINYASSSFCLDELVHIMCGFKEKGRLVLPVFYGVDPSDVRHQKGSCGKALAEHEKKFQNNEKNMERLCRWKIALNQAANIAGYHFNIGSDMNEYEHTLIGKIVKVVSNKINRAPLYVVDYPVGLKSRVSNVNSLLNEACSDEVCMIGIHGTGGIGKSTLARAVYNFIADQFECLCFLENVRENSAKHLQEELLYKTIGLKVKIGGVNEGIGIIKERLRRKRVLLILDDVDKLKQLKFLAGGFDWFGRNSRVIITTRDKSLLTCHGIERIYEVEGLNCGESLELFKQVAFKTKKVDSINDDIVNRAISYASGLPLAIDVIGSNLAGTPIAEWESTLDKYKRIPPHDIQNILKVSFDGLDEEQKNLFLDIACFSKWFHLGQIRANYDHCIKHDVGVLVDKSLIKIHQFGDVILHDLIEHMGKEIVRKESPDHPEKRSRLWFHKDIVDVLEQNKGSSKTKMIYLDYPSKEVVINWNGEAFKKMTNLKTLVIKNANFSEGSRHFPNSLRVLEWEKYPSIPFSILNKKFENMKVLNFDNCEYLTEISNVSGLPNLEEISFENCVNLTTIDNSIGFLSKLELLNAEGCTKLRSFPPLKLPSLKYLNFTDCESLQNFPEILDKIETLENINIYGTSIQEIPVSIQNLIGLVSLNFDTSGKLMFPSICNMPKVEVVRLKGISNLSLFLPMAIMRFANMQVLNLSGSNIRVLPECLKECTSLHHLILDYCYSLEVISAIPPNLQRLSAIDCKSLSKSMLLNKKLHESGRTIEFCFPPAEGEMIPEWFNHQTRGTTDKSGTTFPFWFRNKLPSIMIFFSTNSKMEYLGESSSVLSFNLFINDFKRNFNDIQDKLFQHGWLPSHTYLFNLPMQQKIEIHDILLDSSQPKLMPTLDEAFEKNEWIHAEIKFWSTATLPLYFVEENNADHIRFTNPCRKRKLDELEHIYQDTSLSQSRPLLKNQRLLDVEEVLDTELVEKELQHGMNKLRHDTKSCEYEFGGNSPNKIKMDYLKLFKWARCAAPYISHSKSIIIVFLCVIMCVILFLFKEKTTMLSLGELTCPT* 1133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0424 1132 Pfam NB-ARC domain 208 420 IPR002182 GO:0043531
Tpr2g0424 1132 Gene3D - 16 188 IPR035897 -
Tpr2g0424 1132 SUPERFAMILY "Winged helix" DNA-binding domain 426 529 IPR036390 -
Tpr2g0424 1132 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 29 980 IPR044974 GO:0006952
Tpr2g0424 1132 Pfam TIR domain 18 193 IPR000157 GO:0007165
Tpr2g0424 1132 PRINTS Disease resistance protein signature 226 241 - -
Tpr2g0424 1132 PRINTS Disease resistance protein signature 297 311 - -
Tpr2g0424 1132 PRINTS Disease resistance protein signature 390 404 - -
Tpr2g0424 1132 PRINTS Disease resistance protein signature 672 688 - -
Tpr2g0424 1132 SUPERFAMILY L domain-like 546 827 - -
Tpr2g0424 1132 Gene3D Ribonuclease Inhibitor 551 699 IPR032675 -
Tpr2g0424 1132 Gene3D Ribonuclease Inhibitor 700 839 IPR032675 -
Tpr2g0424 1132 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 164 IPR035897 -
Tpr2g0424 1132 SMART till_3 18 161 IPR000157 GO:0007165
Tpr2g0424 1132 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 449 IPR027417 -
Tpr2g0424 1132 Gene3D - 356 439 IPR042197 -
Tpr2g0424 1132 PANTHER ARCHAEAL ATPASE 29 980 - -
Tpr2g0424 1132 Gene3D - 189 348 IPR027417 -
Tpr2g0424 1132 ProSiteProfiles TIR domain profile. 17 191 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0424 Tpr-Chr2 4934023 4939012 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0424 31 799 WRKY Transcription Factor Family AT4G12020 29.048 2.51e-74 269