Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0423 ATGTTGCATCAAGACCATGCCTTAAAGCTAGGGTCAAAATTTTTGGCCGGAGGATTTGATTGGTTTGGTCGTAACAGCAGAGTCATCATTACCACTCGAGACAAAAGTTTGTTAACATGTCATGGGATTGAAAGAATATATGAAGTAGAAGGCTTAAATTGTGGTAAATCTCTTGAATTGTTTAAGCAGGTGGCTTTTAAAACTAAGAAAGTTGATTCAATTAATGATGATATTGTCAACCGTGCAATTAGTTATGCTTCTGGCCTTCCATTAGCTATAGATGTCATAGGTTCCAATTTGGCAGGAACGCCTATAACAGAATGGGAATCTATATTAGATAAATATAAAAGGATTCCTCCTCATAATATCCAAAATATACTAAAATTTGATTTGGGAAAAATTCGTGCTAATTACGATCATTGCATAAAACATGATGTTAGAGTGTTGGTTGATAAATCTCTCATAAAGATTCATCGATTTGGTAATGTGATATTACATGACTTGATAGAGCATATGGGTAAAGAAATTGTTCGAAAAGAATCACCCGATCATCCTGAAAAACGCTCTAGATTGTGGTTTCACAAAGATATAGTTGAAGTTTTAGAACAAAACAAGGGAACTAGTGAAACTAAAATGATATATCTCGATTGCCCCTCAAAGGAAGTCGTAAAAAATTTGAATGGAGATGCCTTCAAGAAGATGACAAAACTAAAAACACTTGTCATTAAAAATGCTAATTTTTCCGAAGGGTCCCATTATTTTCCAAATAGTTTGAGAGTACTTGAATGGGAAAAATATCCTTCAACACGATTTAGTATTTTGAACAAGGCAAGTGAAATCAGTTAA 846 0.3369 MLHQDHALKLGSKFLAGGFDWFGRNSRVIITTRDKSLLTCHGIERIYEVEGLNCGKSLELFKQVAFKTKKVDSINDDIVNRAISYASGLPLAIDVIGSNLAGTPITEWESILDKYKRIPPHNIQNILKFDLGKIRANYDHCIKHDVRVLVDKSLIKIHRFGNVILHDLIEHMGKEIVRKESPDHPEKRSRLWFHKDIVEVLEQNKGTSETKMIYLDCPSKEVVKNLNGDAFKKMTKLKTLVIKNANFSEGSHYFPNSLRVLEWEKYPSTRFSILNKASEIS* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0423 281 Pfam NB-ARC domain 23 118 IPR002182 GO:0043531
Tpr2g0423 281 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 270 IPR044974 GO:0006952
Tpr2g0423 281 Gene3D - 52 134 IPR042197 -
Tpr2g0423 281 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 133 IPR027417 -
Tpr2g0423 281 SUPERFAMILY "Winged helix" DNA-binding domain 134 202 IPR036390 -
Tpr2g0423 281 PANTHER ARCHAEAL ATPASE 14 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0423 Tpr-Chr2 4919789 4920850 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0423 17 267 WRKY Transcription Factor Family AT5G45050 31.229 4.78e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0423 - - gmx:121173697 282.722