Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0422 ATGAGTAAAATTATCTTCATTAAAGAACGGCTACGTCGAAAGAAGGTCTTATTGATTCTCGATGACGTTGACGAGTTGAAGCAGCTAAAATTTTTGGCCGGAGGATTTGATTGGTTTGGTCGTAACAGCAGAGTCATCATTAGCACTCGAGACAAAAGTTTGTTAACATGTCATGGGATTGAAAGAATATATGAAGTAGAAGGCTTAAATTGTGGTGAATCTCTTGAATTGTTTAAGCAGGTGGCTTTTAAAACTAAGAAAGTTGATTCAATTAATGATGATATTGTCAACCGTGCAATTAGTTATGCTTCTGGCCTTCCATTAGCTATAGATGTCATAGGTTCCAATTTGGCAGGAACGCCTATAACCGAATGGGAATCTATATTAGATAAATATAAAAGGATTCCTCCTCATGATATCCAAAATATACTAAAAGTTAGCTTTGATGGTTTGGATGAAGAACAGAAAAATCTCTTTCTAGATATTGCATGTTTCTCTAAATGGTTTGATTTGGGAAAAATTCGTGCTAATTACGATCATTGCATAAAACATGATGTTAGAGTGTTGGTTGATAAATCTCTCATAAAGATTCATCGATTTGGTAATGTGATATTACATGACTTGATAGAGCATATGGGTAAAGAAATTGTTCGAAAAGAATCACCCGATCATCCTGAAAAACGCTCTAGATTGTGGTTTCACAAAGATATAGTTGAAGTTTTAGAACAAAACAAGGGAACTAGTGAAACTAAAATGATATATCTGGATTGCCCCTCAAAGGAAGTCGTAAAAAATTTGAATGGAGATGCCTTCAAGAAGATGACAAAACTAAAAACACTTGTCATTAAAAATGCTTATTTTTCCGAAGGGTCCCATTATTTTCCAAATAGTTTGAGAGTACTTGAATGGGAAAAATATCCTTCAACACCATTTAGTATTTTGAACAAGAAATTTGAGAATATGAATGTTTTGAAGTTTGACAAATGTGAATATTTAACAGAGATATCAAATGTCTCCGGTCTCCCAAATTTAGAAAAAATTTCATTTGAAAATTGTGTGAATTTAATTACAATTGACAACTCAATTGGGTTTCTGAGCAAACTTGAATTCTTGAATGCTAAGGGTTGCAAGAAGCTTAGGAGTTTTCCACCCTTGAAATTACCTTCTCTTCGACATCTGGATCTTATGGATTGTGAGAGTCTCCAGAATTTTCCAGAAATATTAGACAAGATCGAAACACTAAAAGTAATTGATATTCTTAGAACTTCCATACGAGAGATTCCAGTTTCAATTCAAAATCTAATTGGGCTTGTTTCACTATATTTTGATGCAAATGGAAAGCTAATGTTCCCTAGCATTTGCAACATGCCAAATGTGCAGGATGTTAGCCTCAAAGCAATTAGCAACCTCTCATTATTTCTTCCGCTAGCTATCATGCGGTTTGCTAATATGCGATTTCTAGACCTATCTCGTAGCGATATCAGAGTTATTCCAGAATGCCTTAAAGAATGTACCTCTCTTCATGAACTTATGTTAAATTATTGCTATTCTCTTGAGGATATTTCTGCACTTCCGCCAAATCTACAAAGATTGTCAGCAGTAGACTGCAAATCATTGAATTCCTCAAGTAAAAGCATGTTACTGAATAAGGTATTGTTGTATTTTTTGCCAAAATATTGA 1680 0.3405 MSKIIFIKERLRRKKVLLILDDVDELKQLKFLAGGFDWFGRNSRVIISTRDKSLLTCHGIERIYEVEGLNCGESLELFKQVAFKTKKVDSINDDIVNRAISYASGLPLAIDVIGSNLAGTPITEWESILDKYKRIPPHDIQNILKVSFDGLDEEQKNLFLDIACFSKWFDLGKIRANYDHCIKHDVRVLVDKSLIKIHRFGNVILHDLIEHMGKEIVRKESPDHPEKRSRLWFHKDIVEVLEQNKGTSETKMIYLDCPSKEVVKNLNGDAFKKMTKLKTLVIKNAYFSEGSHYFPNSLRVLEWEKYPSTPFSILNKKFENMNVLKFDKCEYLTEISNVSGLPNLEKISFENCVNLITIDNSIGFLSKLEFLNAKGCKKLRSFPPLKLPSLRHLDLMDCESLQNFPEILDKIETLKVIDILRTSIREIPVSIQNLIGLVSLYFDANGKLMFPSICNMPNVQDVSLKAISNLSLFLPLAIMRFANMRFLDLSRSDIRVIPECLKECTSLHELMLNYCYSLEDISALPPNLQRLSAVDCKSLNSSSKSMLLNKVLLYFLPKY* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0422 559 PANTHER ARCHAEAL ATPASE 5 551 - -
Tpr2g0422 559 Gene3D Ribonuclease Inhibitor 417 553 IPR032675 -
Tpr2g0422 559 Gene3D Ribonuclease Inhibitor 247 416 IPR032675 -
Tpr2g0422 559 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 162 IPR027417 -
Tpr2g0422 559 Gene3D - 69 152 IPR042197 -
Tpr2g0422 559 SUPERFAMILY "Winged helix" DNA-binding domain 139 242 IPR036390 -
Tpr2g0422 559 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 551 IPR044974 GO:0006952
Tpr2g0422 559 PRINTS Disease resistance protein signature 10 24 - -
Tpr2g0422 559 PRINTS Disease resistance protein signature 103 117 - -
Tpr2g0422 559 PRINTS Disease resistance protein signature 385 401 - -
Tpr2g0422 559 SUPERFAMILY L domain-like 262 546 - -
Tpr2g0422 559 Gene3D - 2 61 IPR027417 -
Tpr2g0422 559 Pfam NB-ARC domain 7 134 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0422 Tpr-Chr2 4914961 4919057 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0422 3 512 WRKY Transcription Factor Family AT4G12020 31.769 2.23e-63 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0422 - - mtr:MTR_6g072460 562.762