Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0414 ATGCGAATCATAAAGCATGAATCAAATGACACTCCTTATGCCATCACTGCATTGCTAGTAGATGGTGTCACTCCAACCAGGCGTTTGGAGCATCATATGTTTGAATCAATAGGCATTCGAACAGAGCCTGCAAATAGTGCTGAAGAAGCAATGCAAATTTTGTCGACTGGTGTCAACTTTGACTTCATATTTGTTGATTTTGATTTGCCGATTACCAATGGACCTCAGCTGATGAGACAGATACGTGCAATGGGGATTCGGAGCAAGATGGTGGGGATGTTAGAAAATTACATTAATAATCAAAATCTGCAAATGTTTCAACAAGCAAGAGCTGATGCCTGCATTACAAAACCCTTCAACCAAGAAAGCTTACAACACATGATTGGAATCCTTCAACGCATCTTATGA 408 0.402 MRIIKHESNDTPYAITALLVDGVTPTRRLEHHMFESIGIRTEPANSAEEAMQILSTGVNFDFIFVDFDLPITNGPQLMRQIRAMGIRSKMVGMLENYINNQNLQMFQQARADACITKPFNQESLQHMIGILQRIL* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0414 135 SUPERFAMILY CheY-like 16 129 IPR011006 -
Tpr2g0414 135 Gene3D - 4 133 - -
Tpr2g0414 135 ProSiteProfiles Response regulatory domain profile. 16 132 IPR001789 GO:0000160
Tpr2g0414 135 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 131 - -
Tpr2g0414 135 SMART REC_2 15 128 IPR001789 GO:0000160
Tpr2g0414 135 PANTHER HISTIDINE KINASE RESPONSE REGULATOR AND TRANSCRIPTION FACTOR RR-A-TYPE FAMILY-RELATED 1 131 - -
Tpr2g0414 135 Pfam Response regulator receiver domain 18 128 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0414 Tpr-Chr2 4848552 4850178 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0414 15 121 Response Regulator Gene Family AT3G04280 27.778 2.80e-10 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr2g0414 Response_reg 2.1e-12 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0414 - K07647 cam:101509883 129.028