Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0413 ATGGACGCAAGAATCATAGGACATAAACGACAGAGGCATCCTGAGGAGAAGCAAATCCAAATCAAAAAGCATGAATCAAGCAGCACTCAGTATACCATCAATGCATTGCTAGTAAATGGTGTAACTGCAACTAGACATTTGGAGCGTAATATGCTTGAATCAATAGGTGTTCGAACAGAGTCTGCAATTGGTGCTCAAGAGGCAATGCAAGTTTTGTTGACTGGTGCTAAATTTGATTTCATTTTTGTTGATTTTGATTTGTCCAGTACCAGTGGACCTGAGTTTGTGAGACAGATGCGTGCAATGGGTGTACCAAGCAAGGTGGTGGGCATTTTAACAAACATCAATGATCATGATAAACAAATGTTTCATGAATCAGGAGCTAATGGCATCACCGAGAGACCGTTGACCCGAAAAAGCGTCAAATACATCATTGACCTCCTTCAATGCCTCATGTGA 459 0.4118 MDARIIGHKRQRHPEEKQIQIKKHESSSTQYTINALLVNGVTATRHLERNMLESIGVRTESAIGAQEAMQVLLTGAKFDFIFVDFDLSSTSGPEFVRQMRAMGVPSKVVGILTNINDHDKQMFHESGANGITERPLTRKSVKYIIDLLQCLM* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0413 152 PANTHER HISTIDINE KINASE RESPONSE REGULATOR AND TRANSCRIPTION FACTOR RR-A-TYPE FAMILY-RELATED 7 142 - -
Tpr2g0413 152 SMART REC_2 33 145 IPR001789 GO:0000160
Tpr2g0413 152 Gene3D - 9 148 - -
Tpr2g0413 152 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 142 - -
Tpr2g0413 152 ProSiteProfiles Response regulatory domain profile. 34 149 IPR001789 GO:0000160
Tpr2g0413 152 SUPERFAMILY CheY-like 34 145 IPR011006 -
Tpr2g0413 152 Pfam Response regulator receiver domain 41 141 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0413 Tpr-Chr2 4836945 4838105 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0413 17 145 Response Regulator Gene Family AT3G04280 29.545 3.29e-11 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr2g0413 Response_reg 5.8e-08 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0413 - K24014 cam:101509883 130.954