Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0402 ATGACGGTATCAGTAGGAGAACAAATATACACTAGCTATTATTCTCCGATAGGAGCTAGAGTGAAGTGTCTCTCATATGCCGGTTACTTTATCAACGCCAGAAGGGATGTCTCTGGAACACAGCACATTAAACAATTCTTCAGTCAAATTGTTAAAAAACATGGCTCTGCAGGGAATTTGCCTAGATCATGCACTTCAAGACTTAGTCCAAGGCTGTGCTTTTTCCCTCAATATGTTGTATCACAAATCACCACACCAATCTTCTTTGTAAACGCGACATATGACTCATGGCAGATTAAGAACATTTTGGCACCTGGTGTTTCTGTTCCTCATGGGCACTGA 342 0.4123 MTVSVGEQIYTSYYSPIGARVKCLSYAGYFINARRDVSGTQHIKQFFSQIVKKHGSAGNLPRSCTSRLSPRLCFFPQYVVSQITTPIFFVNATYDSWQIKNILAPGVSVPHGH* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0402 113 PANTHER PECTIN ACETYLESTERASE 16 113 - -
Tpr2g0402 113 Pfam Pectinacetylesterase 16 111 IPR004963 GO:0016787
Tpr2g0402 113 PANTHER NOTUM-RELATED 16 113 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0402 Tpr-Chr2 4720266 4724268 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0402 16 112 Carbohydrate Esterase AT4G19420 65.979 3.39e-42 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0402 K19882 - gmx:100776478 162.54