Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0384 ATGGATATTCAACACAAAAAGAAGGCTTGTGCTGCATGCACATATCAAAGAAAACGATGTAAAAGCAATTGTATTTTAGCTCCTTATTTTCCGGCCGATAAACCAAAAGAGCTTCTCAATGCGAATCGTTTGTTTGGTATTTCGAACATGAAAAATGCACTAAAGGAGATCAAGGATGATGGTGATAAAAATAATATGATGGAATCGATTATTTTTGAATCGGATATGCGTGCAAAATACCCGGTTCATGGATGTCTTGGGATTATTAAGATGTATGAAGGTATGATAAAGGAGTCTTTGCAAGAGTTAGATGATGTAGAAGAGTTACTAAATTTGTGTAAGCTATTTCATCAACAAAATCTTCTATATTTCTTTTCAATGGATCATTCTTTGGTACCTTATTCTACTAGTTCTCAAATTCCAAATTTTCCAATGGATGTTAACAATACTCATGTTCTTGAGAATCTTGATGATAACAATACTTCTTGTATGCAAAATGACCCTTTACAAGAACAAACTATTCTGCCTTACTTTTCGATTAATCATTCTTCGGTATCTTCTACTAGTTCTCAAATTCCCGATATTCTACCTTACTTTTCGAAGAAGAATCATTCTTCGGAACCTTCTACTAGTTCTCAAATTCAAAATTTTCCATTGGATGTTAACAATACTCAAGTTCTTGGAAATCTTGATGTTAACAATACTTTTTGTATGCAAAATGACCCTTTACGAGAACAAAATATTCTACCTTACTTTTCGATGAATCATTCTTGGGAACCTTCTAATAGTTCTCAAATTCTCGATATTTTACCTTAG 816 0.326 MDIQHKKKACAACTYQRKRCKSNCILAPYFPADKPKELLNANRLFGISNMKNALKEIKDDGDKNNMMESIIFESDMRAKYPVHGCLGIIKMYEGMIKESLQELDDVEELLNLCKLFHQQNLLYFFSMDHSLVPYSTSSQIPNFPMDVNNTHVLENLDDNNTSCMQNDPLQEQTILPYFSINHSSVSSTSSQIPDILPYFSKKNHSSEPSTSSQIQNFPLDVNNTQVLGNLDVNNTFCMQNDPLREQNILPYFSMNHSWEPSNSSQILDILP* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0384 271 Coils Coil 89 109 - -
Tpr2g0384 271 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 6 193 - -
Tpr2g0384 271 ProSiteProfiles LOB domain profile. 8 110 IPR004883 -
Tpr2g0384 271 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 6 193 - -
Tpr2g0384 271 Pfam Lateral organ boundaries (LOB) domain 9 105 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0384 Tpr-Chr2 4564056 4564871 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0384 9 114 AS2 family AT3G47870 46.226 4.96e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Tpr2g0384 LOB 5.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0384 - - mtr:MTR_6g011200 150.599