Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0383 ATGAATATCATCAAAGCATACAAGTCTTGTGCAGCTTGCAAGTATCAAAGAAGAAAGTGTTCTAAAGATTGTCCGTTAGCTCCTTATTTTCCGGCCGATAAGCCAAAAATGTTCGCTAATGCTCATCGTTTGTTCGGTGTTTCTAATATATTGACAATACTACAAGAAGTTAAGGATGAAGATAAAGATGAAGCAATGAAATCAATTATTTTTGAGTCGGATATTCGTGCAAGATTTCGGACTCATGGATGTCTCGGTGTTATTAAAATGTACGAAACTGCATTAAAGGAGTGTATTAAAGAGTTAGATGATGTAGAAAGGTTATTAGATTATTGTAAGCTAAATTGTAATTCCGAACCTTCTACTAGTTCTCAAATTCCAATATTTAATAATATTGGTGATGCTCCTAATTATTATCACAATAATATTAGTGATATCATCCCTCCTAGTGAGGGTGACTACTATGCCATGGAAGACAATCCTAATTTGATAGTAACAAAAGGATTATCCAATAATGAAGAATTAGTCCTTGATCAAGGTGTTGATGCACAAATCATTACAAATTTTAATTTGGTGGAAGATAAAGTATTTTCAGATTATAGTGGTGGTGACTATGCCATGGAAGAATTAGTCCTTGATAGAGGTGTTGATACAAAAATTCATACAACTTTTGATTTGGGGGAAGAGGAAATTTTTTCAGATACTTATAATATTGATGATCTTATTTACTTTGGACAACCATTTGAAGAAAAGGATGCATCTCAATTCAGCAGGTGA 777 0.3295 MNIIKAYKSCAACKYQRRKCSKDCPLAPYFPADKPKMFANAHRLFGVSNILTILQEVKDEDKDEAMKSIIFESDIRARFRTHGCLGVIKMYETALKECIKELDDVERLLDYCKLNCNSEPSTSSQIPIFNNIGDAPNYYHNNISDIIPPSEGDYYAMEDNPNLIVTKGLSNNEELVLDQGVDAQIITNFNLVEDKVFSDYSGGDYAMEELVLDRGVDTKIHTTFDLGEEEIFSDTYNIDDLIYFGQPFEEKDASQFSR* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0383 258 Coils Coil 88 108 - -
Tpr2g0383 258 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 8 121 - -
Tpr2g0383 258 ProSiteProfiles LOB domain profile. 8 109 IPR004883 -
Tpr2g0383 258 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 121 - -
Tpr2g0383 258 Pfam Lateral organ boundaries (LOB) domain 9 104 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0383 Tpr-Chr2 4561698 4563208 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0383 9 109 AS2 family AT3G47870 54.455 2.81e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Tpr2g0383 LOB 1.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0383 - - mtr:MTR_6g011200 188.734