Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0382 ATGAATATCATCAAAACAAACAAGGCTTGTGCTGCTTGCAAGTATCAAAGAAGAAAGTGCTCTAAAGATTGCCCTTTAGCTCCTTATTTTCCGGCCGATAAGCCAAAAATGTTCGGCAATGCTCATCGTTTGTATGGCGTGTCAAACATATTGAAGATACTAAAGGAAATTGACGATGATAAAAAGGACGATGCAATGAAATCAATTATCTTTGAGTCGGATATTCGCGCAAAATTTCGGGTTGATGGATGTTTTGGTGTTATTAAGCACTATGAAGGTTTGTTAAAAGAGTCTATTAAAGAGTTGGATCATGTAGAAAAGTTACTAAATTATTGTAAGCTAAATTATCCTCTACAACAACAAAATCTTCATTCTACAGTTGCTAATTATCAAACTCCAAATATTCCAATATTTAACAATATTGGTGATGTTTCTAATTATTATCACAATAGTGAAAATAATAATCATGATACAATGATGAGAGCTTCTTCTTCTTCTTATATTAATATACATCATGATGTTAACAATAGTGGTGGTGACAATGTCATGGAAGACAATTATGATGAAGAATTGAAGCTTGATGGTGGTGCTGATGCACAAATTAGTACTAATTTTGATTTGAAGCAAAAAGAAAGATTATTAGATGGTGATAAATTAGCCATTTCGGATTATGAACTTAATATGTTTATTTATGGTAGACAACCATTTGTGCAAAAGGATGCAGCTGAATTCAGCAGTGTGGAATCAAACCAATCCCAGAATGATCAGTTGAAGAACTTGACGCATATGGAAACGAGCACTCCATCTGAAGTGAGCAAATAG 822 0.3333 MNIIKTNKACAACKYQRRKCSKDCPLAPYFPADKPKMFGNAHRLYGVSNILKILKEIDDDKKDDAMKSIIFESDIRAKFRVDGCFGVIKHYEGLLKESIKELDHVEKLLNYCKLNYPLQQQNLHSTVANYQTPNIPIFNNIGDVSNYYHNSENNNHDTMMRASSSSYINIHHDVNNSGGDNVMEDNYDEELKLDGGADAQISTNFDLKQKERLLDGDKLAISDYELNMFIYGRQPFVQKDAAEFSSVESNQSQNDQLKNLTHMETSTPSEVSK* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0382 273 MobiDBLite consensus disorder prediction 244 273 - -
Tpr2g0382 273 ProSiteProfiles LOB domain profile. 8 109 IPR004883 -
Tpr2g0382 273 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 6 182 - -
Tpr2g0382 273 Pfam Lateral organ boundaries (LOB) domain 9 105 IPR004883 -
Tpr2g0382 273 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 6 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0382 Tpr-Chr2 4556744 4558270 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0382 6 109 AS2 family AT3G47870 52.885 5.90e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Tpr2g0382 LOB 2.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0382 - - mtr:MTR_6g011200 220.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0382 2 4556744 4558270 Tpr2g0382 2 4556744 4558270 ECH