Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0376 ATGGGGTTTGGAAATAAGAATGTAATTAAAGCAGGAAGTTTGAAAGTTGGTAAGTCAAAGGATGATGTTACAAAGAAAAAGAGAAGATGTTGCTTTAGATTCAGTTTTATTAGATGCTGTATACCTTCAAGATCAAAATTTGATAGCTCAATATGTTGCAATGGCACTACTAATACAAAAATTGGTGATAAAGATAATACTAAGTCGGTAATAATTCAATCAGAGGAAAATAAATCTGCATCTGAAACAAACACAAAGGAATCAAATGGTCTTGTAGATTCTTCTACAACAACTAGTAATGGAGAAAGTATATCTTCAACTTCGAAATTCAGTGAGGAATTAAAGGTTGCTTCTTGTTTAAGAAAATTCACATTCAATGGACTTAAGGTAGCAACTAGGAATTTCAGACCAGAGAGTCTTCTAGGTGAAGGAGGGTTTGGTTGTGTCTTCAAAGGTTGGATTGAAGAGAATGGAACTGCTCCTGTGAAACCGGGTACCGGACTTACGGTTGCTGTCAAGATCCTTAACCACAATGGACATCAAGGTCACAAAGAATGGCTTGCTGAATTAAACTATCTCGGCGATCTTGTACATCCTAATCTCGTTAAGTTGATAGGTTTCTGTATTGAAGATGACCAAAGATTATTGGTTTACGAGTTTATGCCGCGAGGAAGTTTGGAGAATCACCTCTTCAGAAGGCCCTTGCCTCTACCTTGGTCTATCAGAATGAAAATTGCACTTGGTGCTGCTAAAGGTCTTGCTTTTCTCCACGAAGGAGCTCAAAGGCCCGTGATATATCGTGATTTCAAGACATCTAATATTCTATTAGATGCGGAATACAATGCGAAGCTTTCTGATTTTGGACTTGCCAAAGATGCTCCTGAGGGGGAAAAAACACATGTATCAACAAGAGTTATGGGAACGTACGGTTATGCTGCTCCGGAATATGTGATGACGGGACATTTATCATCGAAAAGTGATGTCTACAGCTTTGGAGTAGTACTACTCGAAATGCTCACCGGTCGACGAGCTATTGACAAGAAAAGACCAAAAGGAGAGCATAATCTGGTGGAGTGGGCTAGACCGGTACTTGGAGACAGGAGGTCGTTCTACCGAATAATCGATCCCCGTCTTGAAGGTCACTTTTCAGTTAAAGGATCACAGAAAGCAGCCCAGCTGGCTTCTCAGTGCCTTAGCCGCGACCCAAAATCTAGACCTTTGATGAGCGAAATAGTTCAAGCTTTAAAGCCTTTGCCAAACCTTAAGGATATGGCCATATCATCTCATCAATTCAAGATTGCGCGTGTTGATCGGACCATGTCCATGCCGAATTCTAAAAACGGTATTAGAACTGATATAGTATCTTTACCAAAGGGTCAGCCGAAAAGGACCTTGTCGAGTTCACATTATGGACATGCTTCTCCGTTTCCGCGTCATAGCAAGTCTCCAAAACCTATTGCGTAA 1464 0.4064 MGFGNKNVIKAGSLKVGKSKDDVTKKKRRCCFRFSFIRCCIPSRSKFDSSICCNGTTNTKIGDKDNTKSVIIQSEENKSASETNTKESNGLVDSSTTTSNGESISSTSKFSEELKVASCLRKFTFNGLKVATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKILNHNGHQGHKEWLAELNYLGDLVHPNLVKLIGFCIEDDQRLLVYEFMPRGSLENHLFRRPLPLPWSIRMKIALGAAKGLAFLHEGAQRPVIYRDFKTSNILLDAEYNAKLSDFGLAKDAPEGEKTHVSTRVMGTYGYAAPEYVMTGHLSSKSDVYSFGVVLLEMLTGRRAIDKKRPKGEHNLVEWARPVLGDRRSFYRIIDPRLEGHFSVKGSQKAAQLASQCLSRDPKSRPLMSEIVQALKPLPNLKDMAISSHQFKIARVDRTMSMPNSKNGIRTDIVSLPKGQPKRTLSSSHYGHASPFPRHSKSPKPIA* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0376 487 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Tpr2g0376 487 ProSiteProfiles Protein kinase domain profile. 135 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g0376 487 SUPERFAMILY Protein kinase-like (PK-like) 110 415 IPR011009 -
Tpr2g0376 487 PANTHER RECEPTOR-LIKE KINASE PLANT 65 479 - -
Tpr2g0376 487 PANTHER OS01G0588500 PROTEIN-RELATED 65 479 - -
Tpr2g0376 487 MobiDBLite consensus disorder prediction 443 487 - -
Tpr2g0376 487 Pfam Protein kinase domain 138 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g0376 487 Gene3D Transferase(Phosphotransferase) domain 1 221 439 - -
Tpr2g0376 487 MobiDBLite consensus disorder prediction 74 104 - -
Tpr2g0376 487 CDD STKc_IRAK 141 418 - -
Tpr2g0376 487 Gene3D Phosphorylase Kinase; domain 1 119 220 - -
Tpr2g0376 487 ProSitePatterns Protein kinases ATP-binding region signature. 141 173 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0376 Tpr-Chr2 4483449 4487626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0376 87 427 Glycoside Hydrolase AT3G07070 51.873 1.01e-114 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tpr2g0376 Pkinase 5.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0376 - - gmx:100499647 761.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0376 2 4483449 4487626 Tpr6g3200 6 34508934 34513096 PCT