Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0368 ATGGAAATGATAATAAAGACTGAAGAAAACAAGAGAAGAAAATTTATTTCCATGGCTGACGATGATTTTCAAGTAATTGGAAAGAGACGACGAAGAGAGCCAACAGTGGCTGCACTTACATCTGAGGATAACCAAGGTCAGAACCAACAAGTTTGTCAAAATTCTACTACCACCACCACAAAGAGAAGTTCAAGATTTCGTGGTGTCAGCAGACATCGATGGACAGGTCGATATGAAGCTCACTTATGGGACAAACTCTCTTGGAACATGACCCAAAAGAAGAAAGGGAAGCAAGTTTATCTTGGGGCTTACGATGACGAAATATCGGCAGCCAGAGCATATGATTTAGCTGCACTGAAGTACTGGGGAACATTAACTGTCACCAATTTTCCTGTCTCAGAGTATGAGGAACAAGTAGAGATAATGCAAACTATGACAAAAGAGGAGTACTTAGCCACTTTAAGAAGAAAGAGCAGTGGCTTTTCAAGAGGGGCATCAAAGTATAGGGGTGTTGCAAGGCACCACCACAACGGTAGATGGGAAGCACGGATCGGAAGGGTTTTTGGAAACAAGTATCTCTATCTCGGAACCTACAGCACCCAAGAAGAAGCTGCTCGTGCTTATGACATAGCAGCCATTGAGTACAGAGGGAGCCATGCGATAACAAACTTCGACTTGAGTACTTACATGAGATGGCTAAAATCATCAGCAGGAAATATCTCAGAAACAAAACTTGAAAAACTGGAAGTACCAGAGTCTCAGACAGTGGCATCCCGATCTAACTATTCCCCGATAGAGGGGTCGAAATCCTTGGCCCTCCACAACAGTACTTACAATTCAAATTATCTCAATTCACCTCAAAAGTTTGAAGTTTTTGACAATAACATCTCCAGCACTAAGTTGTCTTCTTCTCCAACTGCACTTGGGATCCTTTTCCGGTCTACAATATTTAGAGAATTAGTTGAAAAGAATTCGAACATATCTAGAGATGAAACTGAAGGGGAAGACACAAAGGATCAACAACCACAGATGGCAAGTGGTGTTAATGATGAGTTGGATGGGATCTTCTACGATGGAACTGGGTTATCCCCTTACTGA 1098 0.4208 MEMIIKTEENKRRKFISMADDDFQVIGKRRRREPTVAALTSEDNQGQNQQVCQNSTTTTTKRSSRFRGVSRHRWTGRYEAHLWDKLSWNMTQKKKGKQVYLGAYDDEISAARAYDLAALKYWGTLTVTNFPVSEYEEQVEIMQTMTKEEYLATLRRKSSGFSRGASKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGSHAITNFDLSTYMRWLKSSAGNISETKLEKLEVPESQTVASRSNYSPIEGSKSLALHNSTYNSNYLNSPQKFEVFDNNISSTKLSSSPTALGILFRSTIFRELVEKNSNISRDETEGEDTKDQQPQMASGVNDELDGIFYDGTGLSPY* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0368 365 Gene3D AP2/ERF domain 166 227 IPR036955 GO:0003700|GO:0006355
Tpr2g0368 365 Gene3D AP2/ERF domain 64 133 IPR036955 GO:0003700|GO:0006355
Tpr2g0368 365 MobiDBLite consensus disorder prediction 39 62 - -
Tpr2g0368 365 Pfam AP2 domain 166 217 IPR001471 GO:0003700|GO:0006355
Tpr2g0368 365 Pfam AP2 domain 64 123 IPR001471 GO:0003700|GO:0006355
Tpr2g0368 365 ProSiteProfiles AP2/ERF domain profile. 65 131 IPR001471 GO:0003700|GO:0006355
Tpr2g0368 365 CDD AP2 64 133 IPR001471 GO:0003700|GO:0006355
Tpr2g0368 365 CDD AP2 166 227 IPR001471 GO:0003700|GO:0006355
Tpr2g0368 365 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 9 357 - -
Tpr2g0368 365 SUPERFAMILY DNA-binding domain 64 133 IPR016177 GO:0003677
Tpr2g0368 365 SMART rav1_2 65 137 IPR001471 GO:0003700|GO:0006355
Tpr2g0368 365 SMART rav1_2 167 231 IPR001471 GO:0003700|GO:0006355
Tpr2g0368 365 ProSiteProfiles AP2/ERF domain profile. 167 225 IPR001471 GO:0003700|GO:0006355
Tpr2g0368 365 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 9 357 - -
Tpr2g0368 365 PRINTS Ethylene responsive element binding protein signature 66 77 IPR001471 GO:0003700|GO:0006355
Tpr2g0368 365 PRINTS Ethylene responsive element binding protein signature 207 227 IPR001471 GO:0003700|GO:0006355
Tpr2g0368 365 MobiDBLite consensus disorder prediction 326 353 - -
Tpr2g0368 365 SUPERFAMILY DNA-binding domain 166 227 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0368 Tpr-Chr2 4403143 4405878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0368 61 279 AP2-EREBP Transcription Factor Family AT5G57390 59.545 1.31e-83 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Tpr2g0368 AP2 3.9e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0368 - - ahf:112716370 519.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0368 2 4403143 4405878 Tpr2g0368 2 4403143 4405878 ECH