Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0361 ATGGTGGTTAAAGAGACGGTGGCGGAAGTAATCGCAGCAGCAGCAGACGGTGGCGGAGGTATTTCATCGTCTTCATCAACATCACCTTCGGAAGGTACCTCTTCTGCTTCGTCTCCACCGACACAAAGCGATATAAGCTATACTTCGTATTTATACAATTTCACTTATCACGATCTCAAGGAAGCAACAAAAAACTTCTTACCAGAACTGTTCCTTGGTGAAGGAGGCTTTGGTTCTGTGTATAAAGGTTGGATAGTTCCTAACGAGAGATCTAGAGTGGAGATCCCAATAGCTGTTAAAACTCTTAACATAAATGGTTTTCAAGGCCACAAAGAATGGGAGGCCGAAATAAACCATTTGGGTGCTCTACGGCATCCCAATTTGGTCAAACTCGTTGGATATTGCATTGAAAACGAGCATAGAGTGCTTGTCTATGAGTTCATGCCAAGAGGAAGCTTGGAAAATTATCTGTTTAAGAGACGAACTACGCCTCTCACATGGGGTGTAAGAATGAAAATTATGCTTGGTGCTGCAAAAGGGCTTGCATTTCTGCATGAGGAAGCTAAAAAGCCACTCATATATAGAGATTTCAAAACTTCCAATATCCTATTAGATTCGGAATTCAATGCCAAACTTTCCGATTTTGGGCTAGCTAAAGATGCTCCGGTGGGAGATAAAACTCATGTGTCAACTGAAGTGATTGGAACTCAAGGCTATGTAGATCCTGAGTATGCAATGACAGGACACCTTACATCCAAGAATGATGTCTATAGTTTTGGTGTAGTACTCCTTGAGATGTTAACAGGAAGAAAAGCAATTGACGGTAGAAGGCCAGAAAATGAACAAGTTTTGGTTGAATGGGTAAAACCATTCTTAAAAAACTATGGAGGAGAATACTTTCAAATAATGGATCCTAAACTTCAAGGGCAATATTCAAAAAGAGCTGCTTACAGGGCCATAAAGATAGCGGTAAATTGTATTTACGTTGAACAAAAATTAAGACCGCTTATGAGTGAAGTCGTGAAGGACCTCAAGAATATCCTCGATTACAGTGACATGCCTGGTTCACCATTACCGCCACCACCATTATCGTCTAAGGGATCGGATGCTGGCCCTTCCTCTAGTCATGCTGGTCGCGGTGCTAACAAATATGATCTCAATGCTGCTTCATCATCTTCGGCTATGTCTACTCCAAATCGTTTTCAGGGTTCGCCATTAAGGTTTACCCCTCCTTTTCTTTCACCAATTTCTCATTATGGTGGAAATCCTTGA 1272 0.4159 MVVKETVAEVIAAAADGGGGISSSSSTSPSEGTSSASSPPTQSDISYTSYLYNFTYHDLKEATKNFLPELFLGEGGFGSVYKGWIVPNERSRVEIPIAVKTLNINGFQGHKEWEAEINHLGALRHPNLVKLVGYCIENEHRVLVYEFMPRGSLENYLFKRRTTPLTWGVRMKIMLGAAKGLAFLHEEAKKPLIYRDFKTSNILLDSEFNAKLSDFGLAKDAPVGDKTHVSTEVIGTQGYVDPEYAMTGHLTSKNDVYSFGVVLLEMLTGRKAIDGRRPENEQVLVEWVKPFLKNYGGEYFQIMDPKLQGQYSKRAAYRAIKIAVNCIYVEQKLRPLMSEVVKDLKNILDYSDMPGSPLPPPPLSSKGSDAGPSSSHAGRGANKYDLNAASSSSAMSTPNRFQGSPLRFTPPFLSPISHYGGNP* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0361 423 PANTHER TYROSINE KINASE FAMILY PROTEIN 18 399 - -
Tpr2g0361 423 Pfam Protein tyrosine and serine/threonine kinase 72 280 IPR001245 GO:0004672|GO:0006468
Tpr2g0361 423 CDD STKc_IRAK 72 347 - -
Tpr2g0361 423 MobiDBLite consensus disorder prediction 361 408 - -
Tpr2g0361 423 MobiDBLite consensus disorder prediction 19 41 - -
Tpr2g0361 423 Gene3D Phosphorylase Kinase; domain 1 29 147 - -
Tpr2g0361 423 MobiDBLite consensus disorder prediction 18 41 - -
Tpr2g0361 423 Gene3D Transferase(Phosphotransferase) domain 1 148 353 - -
Tpr2g0361 423 MobiDBLite consensus disorder prediction 385 404 - -
Tpr2g0361 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Tpr2g0361 423 PANTHER OS01G0588500 PROTEIN-RELATED 18 399 - -
Tpr2g0361 423 ProSitePatterns Protein kinases ATP-binding region signature. 72 100 IPR017441 GO:0005524
Tpr2g0361 423 SUPERFAMILY Protein kinase-like (PK-like) 36 344 IPR011009 -
Tpr2g0361 423 ProSiteProfiles Protein kinase domain profile. 66 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0361 Tpr-Chr2 4335443 4344435 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0361 54 344 Glycoside Hydrolase AT3G07070 51.536 1.11e-101 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tpr2g0361 PK_Tyr_Ser-Thr 1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0361 - - mtr:MTR_3g462840 524.242