Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0348 ATGGCCGCTTCAACAATGTCTCTCTCTTCTTCAACATTGGTTGGGAAAGCCATCAAACTTTCCCCATCCACTCAGGACTTTGGAGTGGGAAGAATCACAATGAGAAAAACGACCCCAAAGAAAGTTTCTTCTGGTAGTCCATGGTACGGTCCAGACCGTGTCAAGTATTTGGGTCCATTCTCGGGTGAAGCCCCATCCTATCTCACTGGTGAATTTCCTGGTGACTATGGTTGGGACACTGCTGGACTTTCAGCTGATCCAGAGACCTTTTCCAAAAATCGTGAACTCGAGGTCATCCACAGTAGATGGGCTATGTTGGGTGCCTTGGGATGTGTCTTCCCTGAGCTCTTGGCTCGCAATGGTGTCAAATTCGGCGAGGCTGTTTGGTTCAAGGCAGGATCTCAAATCTTCAGTGAAGGTGGACTTGACTACTTGGGTAACCCAAGCCTAGTCCATGCACAAAGTATCCTTGCTATATGGGCTGTCCAAGTTATCTTAATGGGTGCTGTTGAGGGTTACCGTATTGCTGGTGGACCTCTTGGTGAGGTAGTCGACCCACTCTACCCAGGTGGAAGCTTTGACCCATTAGGCCTTGCTGATGATCCAGAAGCCTTTGCAGAGTTGAAGGTAAAAGAGTTAAAGAATGGTAGATTAGCTATGTTCTCAATGTTTGGATTCTTTGTTCAAGCTATTGTAACCGGAAAAGGACCTATAGAGAACCTTGCTGACCACCTTTCTGACCCAGTTAACAACAACGCATGGGCTTATGCCACAAACTTTGCCCCAGGAAAGTGA 795 0.473 MAASTMSLSSSTLVGKAIKLSPSTQDFGVGRITMRKTTPKKVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLSDPVNNNAWAYATNFAPGK* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0348 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 264 IPR001344 GO:0009765|GO:0016020
Tpr2g0348 264 Gene3D Chlorophyll a/b binding protein domain 55 257 - -
Tpr2g0348 264 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 264 - -
Tpr2g0348 264 Pfam Chlorophyll A-B binding protein 64 230 IPR022796 -
Tpr2g0348 264 SUPERFAMILY Chlorophyll a-b binding protein 47 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0348 Tpr-Chr2 4160324 4161334 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0348 1 264 Chloroplast and Mitochondria Gene Families AT2G34430 87.218 3.46e-170 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0348 K08912 - gmx:547819 502.286