Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0347 ATGGCTTCTTCAACAATGGCTCTCTCTTCTCCATCATTGGTTGGGAAGGCAATCAAGCTTTCCCCCTCCACACCAGCCCTTGGCATGGGAAGAGTGACCATGAGAAAAACAACCACCAAGAAAACGATTCCTTCTGGAAGCCCGTGGTACGGTCCAGACCGTGTCAAGTACTTGGGTCCATTCTCTGGTGAAGCTCCATCCTACCTTACTGGCGAGTTTCCTGGTGACTATGGTTGGGATACTGCTGGACTCTCTGCTGACCCAGAGACATTTGCCAAAAACCGTGAACTTGAGGTTATCCACAGTAGATGGGCTATGTTGGGAGCCTTGGGATGTGTCTTCCCCGAGCTCTTGTCCCGCAATGGTGTCAAATTCGGCGAGGCTGTGTGGTTCAAGGCAGGATCTCAAATCTTCAGTGAGGGTGGTCTTGACTACTTGGGTAACCCAAGCCTAGTCCATGCACAAAGTATCCTTGCTATCTGGGCTGTCCAAGTTATCTTAATGGGAGCTGTTGAGGGTTACCGGATTGCTGGTGGACCTCTTGGTGAAGTTGTCGACCCACTCTACCCAGGTGGTAGCTTCGACCCATTAGGCCTAGCTGACGACCCAGAGGCTTTCGCTGAATTGAAGGTGAAGGAACTTAAGAATGGTAGGTTAGCTATGTTCTCTATGTTTGGATTCTTCGTGCAGGCTATTGTGACCGGAAAGGGACCTCTTGAAAACCTTGCTGATCACATTGCTGACCCTGTCAACAACAATGCTTGGGCCTTTGCCACAAACTTTGTCCCCGGAAATAAAATGGCTTCTTCAACAATGGCTCTCTCTTCACCATCATTGGTTGGGAAGGCAATCAAGCTTTCCTCCTCCACACCAGCCCTTGGCATGGGAAGAGTGACCATGAGAAAAACAACCACCAAGAAGACGGTTCCTTCTGGAAGCCCGTGGTACGGTCCAGACCGTGTTAAGTACTTGGGTCCATTCTCTGGTGAAGCTCCATCCTACCTTACTGGCGAGTTTCCTGGTGACTATGGTTGGGATACTGCTGGACTCTCTGCTGACCCAGAGACATTTGCCAAAAACCGTGAACTTGAGGTCATCCACAGTAGATGGGCTATGTTGGGAGCCTTGGGATGTGTCTTCCCTGAGCTCTTGTCCCGCAATGGTGTCAAATTTGGAGAGGCCGTGTGGTTCAAGGCAGGATCCCAAATCTTCAGTGAAGGTGGACTGGACTACTTGGGTAACCCAAGCTTAGTCCATGCACAAAGTATCCTTGCTATCTGGGCCGTCCAAGTTATCTTAATGGGAGCTGTTGAGGGTTACCGTATTGCTGGCGGACCTCTTGGTGAAATTGTCGACCCACTCTACCCCGGAGGCAGCTTTGATCCATTAGGCCTAGCTGACGACCCTGAGGCTTTTGCGGAATTGAAGGTGAAAGAACTCAAGAATGGTAGGTTAGCTATGTTCTCTATGTTTGGTTTCTTCGTTCAAGCTATTGTAACCGGAAAAGGACCTATAGAGAATCTTGCTGACCACCTTGCTGACCCGGTAAACAACAACGCCTGGGCCTTTGCCACAAACTTTGCTCCTGGAAAGTGA 1596 0.4994 MASSTMALSSPSLVGKAIKLSPSTPALGMGRVTMRKTTTKKTIPSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGNKMASSTMALSSPSLVGKAIKLSSSTPALGMGRVTMRKTTTKKTVPSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAVQVILMGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFAPGK* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0347 531 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 264 - -
Tpr2g0347 531 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 267 531 - -
Tpr2g0347 531 Gene3D Chlorophyll a/b binding protein domain 322 524 - -
Tpr2g0347 531 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
Tpr2g0347 531 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
Tpr2g0347 531 SUPERFAMILY Chlorophyll a-b binding protein 314 528 - -
Tpr2g0347 531 Pfam Chlorophyll A-B binding protein 65 231 IPR022796 -
Tpr2g0347 531 Pfam Chlorophyll A-B binding protein 331 497 IPR022796 -
Tpr2g0347 531 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 267 531 IPR001344 GO:0009765|GO:0016020
Tpr2g0347 531 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 264 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0347 Tpr-Chr2 4151097 4155633 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0347 267 531 Chloroplast and Mitochondria Gene Families AT1G29930 88.764 3.99e-169 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0347 K08912 - han:110920125 904.82