Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0346 ATGGCTGCTTCATCAATGGCTCTCTCTTCATCTTCTTCTTCATTGGTCGGGAAGGCAATCAAGCTTTCCCCATCCACTCCGGACCTTGGGGTGGGAAGAATCACAATGAGGAAAACAGCCACCAAGAAGAATGTTTCTTCAGGAAGTCCATGGTACGGTCCAGACCGTGTCAAGTACTTAGGTCCATTCTCAGGTGAAGCTCCATCCTACCTCACTGGTGAATTTCCCGGTGATTATGGTTGGGACACTGCTGGACTATCAGCCGACCCAGAGACATTTGCAAAAAACCGTGAACTTGAGGTTATCCACAGTAGATGGGCTATGTTGGGAGCCTTGGGATGTGTCTTCCCAGAGCTCTTGGCACGCAATGGTGTCAAATTCGGTGAGGCTGTGTGGTTCAAGGCAGGATCCCAAATATTCAGTGAGGGTGGACTTGACTACTTGGGTAACCCAAGCCTAGTCCACGCACAAAGTATCCTTGCTATTTGGGCCGTCCAAGTTATCTTAATGGGAGCTGTTGAGGGTTACCGTATTGCTGGCGGACCTCTTGGAGAAGTTGTCGACCCACTCTACCCCGGAGGGAGCTTCGACCCATTGGGCCTCGCTGAAGACCCCGAGGCTTTTGCAGAGTTAAAGGTGAAAGAACTCAAAAATGGTAGGTTAGCTATGTTCTCTATGTTTGGATTCTTCGTTCAAGCTATTGTAACCGGAAAAGGTCCTATAGAGAATCTTGCTGACCACCTTGCTGACCCAGTTAACAACAATGCTTGGGCCTTCGCCACAAACTTTGCCCCAGGAAAGTGA 804 0.4938 MAASSMALSSSSSSLVGKAIKLSPSTPDLGVGRITMRKTATKKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFAPGK* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0346 267 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 267 IPR001344 GO:0009765|GO:0016020
Tpr2g0346 267 Gene3D Chlorophyll a/b binding protein domain 58 260 - -
Tpr2g0346 267 SUPERFAMILY Chlorophyll a-b binding protein 50 264 - -
Tpr2g0346 267 Pfam Chlorophyll A-B binding protein 67 233 IPR022796 -
Tpr2g0346 267 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0346 Tpr-Chr2 4147471 4148563 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0346 1 267 Chloroplast and Mitochondria Gene Families AT1G29930 87.732 2.19e-170 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0346 K08912 - gmx:547819 490.73