Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0331 ATGGATGCAATGGAGAAAAATTCAAGATATGTAAAGAGTGATAAAAAAATTGAATTGCTACCTGGATTTAGGTTTCATCCAACAGATGAAGAACTCATAACTCATTACCTATCTCAAAAAGTTCTTGATAATTGCTTTTGTGCTATTGCCATTGGAGAAGCTGATTTGAATAAGTGTGAACCTTGGGATTTGCCTTGGAGGGCCAAAATGGGTGAGAAGGAGTGGTATTTTTTTTGTATGAGGGACAGAAAATATCCTACCGGTCTAAGGACAAATAGGGCCACAAATGCTGGATATTGGAAGGCAACAGGTAAAGACAAAGAAATATATAGAGAAAAGACACTAATTGGAATGAAGAAGACACTTGTTTTCTACAAAGGAAGAGCTCCTAAAGGTGAAAAAACAAATTGGGTCATGCATGAATACAGATTAGAAGACACATATACTTTGCAAACTATATCCAAAAAAGCTATGAAGGAGTGGTCTATATGCAGAGTGTTTGAGAAAGGGTATTGTGGAAAGAAAATGCATATTCAAGATTTGGTAAGCTTCAATTCAATTGGAAAAGAACAACTACCTCAATTGATGGATTCACCACCATACAATAGTGAAACAAAAAATACTATTGGAGATTCATCACATGTGACATGTTTGAGTGATCCTAACCTAATTGATTATAATCAAAGGACACAAGATATTGACAACAACATAGTTTATGAAACTCCAATGTTAGCATCTTCATATTCTTCAAACCCTTCTTATGGTAATAGTATTTCCCCTACCTCATGGGCCCCTACTTTGTCACACAAATCAAAACAAATTGGAAATTCACATTCTTCAGATTGTTATATAGTTCAAGAACAATCCATGTTGAATGAAAATAATGGAACAAGTACAAAGACAAAAAATAAGAAAGCTCAAGAATGTGACTTTGATGTTGACATTTCATCTATGATGTACAACAATGAAATATTTCAAAGACCATATGTGAGTGAAGAATATTCATCAGATTCAATAGGACATTTTGAAAGTGGTTATCTATGGAATTTTTGA 1053 0.3371 MDAMEKNSRYVKSDKKIELLPGFRFHPTDEELITHYLSQKVLDNCFCAIAIGEADLNKCEPWDLPWRAKMGEKEWYFFCMRDRKYPTGLRTNRATNAGYWKATGKDKEIYREKTLIGMKKTLVFYKGRAPKGEKTNWVMHEYRLEDTYTLQTISKKAMKEWSICRVFEKGYCGKKMHIQDLVSFNSIGKEQLPQLMDSPPYNSETKNTIGDSSHVTCLSDPNLIDYNQRTQDIDNNIVYETPMLASSYSSNPSYGNSISPTSWAPTLSHKSKQIGNSHSSDCYIVQEQSMLNENNGTSTKTKNKKAQECDFDVDISSMMYNNEIFQRPYVSEEYSSDSIGHFESGYLWNF* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0331 350 Gene3D NAC domain 28 172 IPR036093 GO:0003677|GO:0006355
Tpr2g0331 350 PANTHER NAC DOMAIN-CONTAINING PROTEIN 92-LIKE 11 312 - -
Tpr2g0331 350 Pfam No apical meristem (NAM) protein 21 144 IPR003441 GO:0003677|GO:0006355
Tpr2g0331 350 SUPERFAMILY NAC domain 16 169 IPR036093 GO:0003677|GO:0006355
Tpr2g0331 350 ProSiteProfiles NAC domain profile. 19 169 IPR003441 GO:0003677|GO:0006355
Tpr2g0331 350 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 11 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0331 Tpr-Chr2 3943467 3945886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0331 17 350 NAC Transcription Factor Family AT5G07680 49.853 6.26e-99 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr2g0331 NAM 1.5e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0331 - - gmx:100785620 435.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0331 2 3943467 3945886 Tpr2g0331 2 3943467 3945886 ECH