Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0324 ATGGCACCTTTTGTATTGACAGTGTCACAAGATGGAACAGGGAACTACAGAACAGTACAAGAAGCCATTGATGCCGTGCCACTCGGCAATACTCATAGGACGGTGATAAGGATATCGCCGGGAATCTACCGGCAACCACTATATGTTGCAAAGACTAAGAACTTCATCACTTTCGCTGGTTTGTGTCCTGAGGATACTGTTCTGACATGGAATAATACTGCTAATAAAATTGATCACCACCAAGGTTCTAAGGTGATAGGGAATGGAACTTTTGGTTGTGGTAGTACTATTGTTGAAGGGGAAGACTTTATTGCTGAGAATATTACTTTTGAAAATTCTTCTCCTCAGGGTTCAGGGCAAGCAGTGGCAGTTAGAGTATCAGCAGACAGATGTGCATTTTATAATTGCAGGTTCCTTGGATGGCAGGACACACTTTATTTACATTATGGAAAACAATATTTGAAAGATTGTTATATTGAAGGAAGTGTAGACTTCATTTTTGGTAATAGCACTGCACTCTTGGAGCATTGCCATATCCACTGCAAGTCTGCAGGGTTCATAACCGCACAGAGTAGAAAATCTCCGCACGAAAAAACTGGTTATGTATTCCTAAGATGTGTTATAACAGGCAATGGAGGAAGTTCATATGCATATCTTGGAAGACCATGGGGACCTTTTGGAAGAGTAGTCTTTGCATTTACTTATATGGATCCTTGTATAAAATCTCCTGGTTGGAATAATTGGGGAAAAGTTGAGAATGAAAAAAGTGCTTGCTTCTACGAATACAGGTGTTTTGGACCGGGTTTTGTTCCATCGAAACGCGAGAAATGGGCAAGAGTGTTGAAGGATAAAGAAGCTGAGCAATTTCTCATGCATAGCTTCATTGATCCAGAACCACAAAGACCTTGGCTTGCTCAAAGAATGGCCTTAAGGATTCCATATTCTGCTTAG 951 0.408 MAPFVLTVSQDGTGNYRTVQEAIDAVPLGNTHRTVIRISPGIYRQPLYVAKTKNFITFAGLCPEDTVLTWNNTANKIDHHQGSKVIGNGTFGCGSTIVEGEDFIAENITFENSSPQGSGQAVAVRVSADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSAGFITAQSRKSPHEKTGYVFLRCVITGNGGSSYAYLGRPWGPFGRVVFAFTYMDPCIKSPGWNNWGKVENEKSACFYEYRCFGPGFVPSKREKWARVLKDKEAEQFLMHSFIDPEPQRPWLAQRMALRIPYSA* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0324 316 SUPERFAMILY Pectin lyase-like 3 303 IPR011050 -
Tpr2g0324 316 PANTHER PECTINESTERASE 1 315 - -
Tpr2g0324 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 315 - -
Tpr2g0324 316 Pfam Pectinesterase 7 296 IPR000070 GO:0030599|GO:0042545
Tpr2g0324 316 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
Tpr2g0324 316 Gene3D - 4 309 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0324 Tpr-Chr2 3866532 3869402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0324 5 309 Carbohydrate Esterase AT5G47500 38.854 7.46e-70 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0324 K01051 - cit:102623565 580.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0324 2 3866532 3869402 Tpr2g0324 2 3866532 3869402 ECH