Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0314 ATGGCAAGAAAGAGAAAGGTTTCTGAAGTAGTTGAAGAAGGAAGCATGGTTTGGGATGAAATGATGAAAGAAGCTGCATCACTTGGTGGAGCAAGGCGAGTCCGAAAGAGATTTGTCGGTGTTCGACAAAGGCCATCGGGTAGATGGGTTGCTGAAATTAAAGATACCATTCAAAAGATAAGAGTTTGGTTAGGAACTTTTGATACAGCTGAAGAAGCTGCAAGAGCTTATGATGAAGCTGCTTGTTTGCTTCGCGGCGCAAATACTCGAACAAATTTTTGGCCTTGTTCTCAATCTTCAACTAGTCCTGCTCTTTCTTCAAAGATCACTAATCTTCTACTTCAAAGACTTAAAGAAAGGAATATGAATATGAATAACTCCTGTTCATCCTTTTCTTCGTCGAAATTTACTTCCTTGTTGGGGAGTTCAGGGGAGCGTCAGGAGCAACAACGAGTCAATGCTCAGGATCATCAGGAGATCCAACAAGTGGAGACTTATGAAGCAGGATCAAAAGATTTTTCAATTGATCAATTCACCGATTTCCTTAATGATCATGTAGATTATACAACAATCAACAATGATATCATCAATGACACTGCACAACTCGATTACATTTCGAGTAGTTTCGAGTCATGTTTAACCGAAAACAATGGTTGCAACAAGGAAGATGAAATGAATGTGGAATCTAAATCAAACAATGTGACACAAACTTCAAGTGGTGGTGATAGTAATTCAGAAGATAGTGAAGAAGAAGTCAATAATGATGTTCCTGATTTTCGATTCCTCGACGATATTGCTCCAACTAGTTACTATTCACCTTTTGAAATTGCTGAAGAAATGGAAGAGCAAATGGAGACAGAAAGTTTTTGTGATGAACCTTCAATGATTAGAGCTGTTATGAAAAGAATGAAATATGAAAGAAAATTTTCAGCTTCTCTTTATGCATTCAATGGAATACCTGAATGCTTGAAGTTGAAACTTGAATCTCAAGGAAACAATATTTCTGATCAATTGAACAATCTCAAGGAAGCATGTAGCAAGAATAAAGTTGAGAAGAAGAAAGATGAGAAAGATGAAGAAAATAATCAAAGTTCAATTGAGTTGGAGTCTTCATCTTTGTCTAGGAATGATAGTGATATTTTCCTTTGGAATTCACTTGATCTTCCTCCAATTTGTTTTGTTAACTTACTTGAAAGTGGTTCATTTAATTAG 1212 0.3639 MARKRKVSEVVEEGSMVWDEMMKEAASLGGARRVRKRFVGVRQRPSGRWVAEIKDTIQKIRVWLGTFDTAEEAARAYDEAACLLRGANTRTNFWPCSQSSTSPALSSKITNLLLQRLKERNMNMNNSCSSFSSSKFTSLLGSSGERQEQQRVNAQDHQEIQQVETYEAGSKDFSIDQFTDFLNDHVDYTTINNDIINDTAQLDYISSSFESCLTENNGCNKEDEMNVESKSNNVTQTSSGGDSNSEDSEEEVNNDVPDFRFLDDIAPTSYYSPFEIAEEMEEQMETESFCDEPSMIRAVMKRMKYERKFSASLYAFNGIPECLKLKLESQGNNISDQLNNLKEACSKNKVEKKKDEKDEENNQSSIELESSSLSRNDSDIFLWNSLDLPPICFVNLLESGSFN* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0314 403 CDD AP2 36 93 IPR001471 GO:0003700|GO:0006355
Tpr2g0314 403 Gene3D AP2/ERF domain 36 94 IPR036955 GO:0003700|GO:0006355
Tpr2g0314 403 Coils Coil 324 367 - -
Tpr2g0314 403 MobiDBLite consensus disorder prediction 349 370 - -
Tpr2g0314 403 MobiDBLite consensus disorder prediction 223 257 - -
Tpr2g0314 403 PANTHER AP2/ERF DOMAIN TRANSCRIPTION FACTOR 8 345 - -
Tpr2g0314 403 SMART rav1_2 37 100 IPR001471 GO:0003700|GO:0006355
Tpr2g0314 403 SUPERFAMILY DNA-binding domain 37 94 IPR016177 GO:0003677
Tpr2g0314 403 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 8 345 - -
Tpr2g0314 403 MobiDBLite consensus disorder prediction 349 364 - -
Tpr2g0314 403 Pfam AP2 domain 37 86 IPR001471 GO:0003700|GO:0006355
Tpr2g0314 403 ProSiteProfiles AP2/ERF domain profile. 37 94 IPR001471 GO:0003700|GO:0006355
Tpr2g0314 403 PRINTS Ethylene responsive element binding protein signature 38 49 IPR001471 GO:0003700|GO:0006355
Tpr2g0314 403 PRINTS Ethylene responsive element binding protein signature 60 76 IPR001471 GO:0003700|GO:0006355
Tpr2g0314 403 MobiDBLite consensus disorder prediction 229 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0314 Tpr-Chr2 3803092 3804451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0314 35 113 AP2-EREBP Transcription Factor Family AT5G19790 73.418 6.91e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Tpr2g0314 AP2 7.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0314 K09286 - gmx:100790398 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0314 2 3803092 3804451 Tpr2g0314 2 3803092 3804451 ECH