Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0310 ATGGACATCCTCTTTTTACAATTGCATTTGCATGATGATGCCGAAATAGAAGGATTTTGTTTAAAGTTCAAAGATGGTAAAAGCAGCACTATCGACGTGCCAAGAGTTTTTGTTCACATTACCAACGACTTACCTAGTCTTCAACTGAGGCTTCATTGTAAAGACAAAAATCGTGATCTTGGAGAGCAATTACTAAGTGTTGGACAAAGTTTTGTCTTTGATTTTAAACCTAATTTTTTTGGAGTATCCTTGTATTTTTGTTCATTTTCATATGTCGGAGGATTTCACTACTTTGACATTTATGATGAACATCGAGATAAGGATAATTGCAAACATGAATGTCATTGGAAAATAAAGAATGGAGGACCATGTAAGGAAGTATCTCCGACTGAAGAAGAATGTTTTCAATGGAATAAAGATGTTTTAGAATGA 432 0.338 MDILFLQLHLHDDAEIEGFCLKFKDGKSSTIDVPRVFVHITNDLPSLQLRLHCKDKNRDLGEQLLSVGQSFVFDFKPNFFGVSLYFCSFSYVGGFHYFDIYDEHRDKDNCKHECHWKIKNGGPCKEVSPTEEECFQWNKDVLE* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0310 143 Pfam Plant self-incompatibility protein S1 38 137 IPR010264 -
Tpr2g0310 143 PANTHER S-PROTEIN HOMOLOG 18-RELATED 20 137 - -
Tpr2g0310 143 PANTHER - 20 137 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0310 Tpr-Chr2 3769264 3771952 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0310 28 142 Carbohydrate Esterase AT3G16970 41.803 1.43e-25 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0310 - - cam:105852946 131.339