Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0307 ATGATTTCGGTTTCAAAAAATGTGTTGTTTGTTTCTATGTTACTAACTATTGTTGTTGTTTTACAGTTTAAAGATGGTGAAAGTGGCCCTTTCGATAAGCCAAGAGTATATGTTTCTATTGTCAACGATTTACCTCATATGCAACTAAGGTTTCATTGTAAAGACAAAAAAAATGATCTTGGAGAGCAATTACTTCCAAATACTGGACAAAGTTTCACCTTTGATTTTCAACCTAGTTTTTGGGGTGTAACTTTATGGTATTGTTCATTTTCATTTTATGGATCAGAAATTAAATGGTTTGATATTTATGTTGAAAAAAGAGATCAAGATAATTGTAAACATGAATGTCATTGGAAAATTAGGACAGGAGGACCATGTAAGGAAGTATCTCCATCTGAAGAAGAATGTTTTCAATGGAATAAAGATGTAGATTCATCAACAAGACAACTTGGTCAATAA 459 0.3115 MISVSKNVLFVSMLLTIVVVLQFKDGESGPFDKPRVYVSIVNDLPHMQLRFHCKDKKNDLGEQLLPNTGQSFTFDFQPSFWGVTLWYCSFSFYGSEIKWFDIYVEKRDQDNCKHECHWKIRTGGPCKEVSPSEEECFQWNKDVDSSTRQLGQ* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0307 152 PANTHER S-PROTEIN HOMOLOG 18-RELATED 13 139 - -
Tpr2g0307 152 PANTHER - 13 139 IPR010264 -
Tpr2g0307 152 Pfam Plant self-incompatibility protein S1 38 139 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0307 Tpr-Chr2 3750718 3751176 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0307 31 140 Carbohydrate Esterase AT3G16970 43.590 1.50e-24 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0307 - - mtr:MTR_6g004290 130.183