Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tpr2g0293 | ATGGCGACTGCGAAACCTCAACGAACTCCACAAGAAGTGGAAGACATCATCATCCGCAAAATCTTTCATGTAACCATCACCGGAGAATCAACAACCACCACCGGAGTAACCGATTCGAGAATCGTTTATCTCGAACTAACCGCCGCAGAGATTCTCAGCGAAGGAAAAGACCTTCTCCTTTCTCGTGATGTTATGGAACGAGTCCTAATCGATCGTCTTTCCGGCGATTTCCCCACCGCCGGTGCCGAAAACTCACCGTTTCAGTATCTTCTCGGTTGTTACAACCGAGCTCACGATGAAGGGAAGAAAATCGTGAACATGAAGGATAAAAACCTTAGGTCAGAGATGGAAACTGTTGTGAAACAAGCGAAGAAGCTTTGTGTTTCGTATTGTAGAATTCATCTCGCGAATCCTGAGCTATTCGCGAGTCAGAATTCAAATTCCGGCACAGGAAAGTCGCCTCTGTTGCCGTTGATTATATCGGAGTGTGGTGGAGGTGGTGGAATGGGGGTTTTCGGTAGTGGTAGTGATACTGGAGGAGTGAAAAGTCCTCCAGGGTTTTTAGATGAGTTTTTTAGGGATCCTGATTTTGAAAGTTTGGATAGAATTTTGAAAGGGTTGTATGAGGAATTAAGAGGGAATGTGGTGAAAATTTCGGTTCTTGGAAATTTTCAGGATTCTCTTAGGGCTTTGTTGTTTTTGGTTAGGTTACCTGTTGGTGCTAAGTCTCTTGTGAGTCATGAATGGTGGATTCCTAAAGGTCTTTATATGAATGGTCGAGCTATCGAAATGACTAGCATTTTGGGTCCTTTTTTCCATATCAGTGCTCTTCCTGATCAAACCTTCTTCAAGAGTAATCCGGATATTGGGCAGCAGTGCTTTTCTGATGCATCAACTCGGCGGCCATCTGATTTATTATCTTCATTCACGACCATTAAAAATGTCATGAATACCTTATATGATGGCCTATCTGAAGTACTCCGCAACCTCCTTAGAAGTACAGACACTCGTGAAAATGTACTTGAGTATCTTGCAGAGGTGATCAATCTAAATGCATCCAGGGCCCATATACAGGTTGACCCGATTACTTGTGCAAGTTCAGGAATGTTTGTAAATCTCAGTGCAGTCATGCTTCGCCTCTGCGAACCATTTTTAGATGCAAATCTAACAAAAAGGGATAAAATTGATGCCAAATATGTACACCACGCAAACCGTTTGAAGCTAAGTGGTTTGACTGCCCTTCATGCGTCATCAGAAGAAGTTACTGAATGGCTTGATAGTAAAAACCCAGCTAAGGAAGGGGAAATGATTCAATGTAATGATGGTGAGAAACGTCTGAAACAATCTCAAGAGGCCACCAGTTCTGGTAGTAATAATGCCAGTGCAAAATATTCATTTATATGTGAATGCTTTTTTATGACTGCAAGAGTGCTCAACTTGGGGCTTTTAAAAGCATTTTCTGACTTCAAACACTTAGTTCAGGATATTTCTAGAAGTGAGGATACTCTTGCCACACTTAAAAACATGCAGGGACAGTCACCTTCTCCTCAATTGGAATTGGATATAACTCGACTTGAGAAAGAACTTGAGTTGTATTCACAGGAAAAACTTTGTTATGAAGCTCAGATATTAAGGGATAACACATTTATTCAGAATGCACTTTCGTTCTACCGCTTGATGATTGTCTGGTTGGTTGGCTTGGTTGGCGGATTTAAGATGCCTCTACCACCAACTTGCCCAATGGAATTTTCTGCCATGCCTGAACATTTTGTAGAAGATGCCATGGAACTTCTAATATTTGCTTCCCGGATTCCAAAGGCCTTAGATGGAGTTGTGCTGGATGAGTTTATGAACTTCATAATTATGTTCATGGGCAGCCCTGATTTTATCAAAAACCCATATCTGAGAGCCAAGATGGTCGAAGTTCTGAACAACTGGATGCCTCGTAGGAGTGGCTCATCTGCTACAGCTACTCTATTTGAAGGGCATCAACTGTCTCTTGAGTATCTTGTGAGGAATCTTCTGAAACTTTACGTTGACATTGAGTTCACTGGTTCTCACACACAGTTCTACGACAAGTTTAACATCCGCCATAATATCGCTGAACTCCTTGAATACCTGTGGAATGTCCCCAGTCATCGTAGTGCTTGGAGACAGGTAATACATGAAAGACATTTGAATTTTTTATCTCTCACGATACTCTACTGCATTCAGTTTTTGCTGAACTTAATTTTGTTACAGATTGCTAAAGAGGAGGAAAAGGGTGTCTATCTCAATTTCTTAAACTTTCTCATTAATGATAGTATTTATCTTCTCGATGAAAGTTTGAACAAAATTCTTGAGCTAAAAGAATTGGAGGCTGAGATGTCAAATACTGCCGAATGGGAGCGGCGGCCAGTTCAAGAGAGGCAGGAGAGGACCCGGTTATTCCACTCTCAAGAAAATATTATTCGGATAGATATGAAGTTGGCCAATGAAGATGTCAGTATGCTTGCATTTACTTCCGAGCAGATTACTGCTCCATTCCTGCTTCCTGAGATGGTTGATCGAGTGGCCAGCATGCTCAATTACTTTCTGCTGCAATTGGTGGGGCCCCAAAGAAAATCACTCAGTCTGAAAGATCCTGAAAAATATGAATTTCGTCCAAAGCATTTGCTTAAACAGATTGTGCATGTATATGTTCATCTGACTAGAGGTGACACAAATTCTATCTTCCCGTCTGCCATATCAAAGGATGGCCGATCATACAATGATCAGTTGTTTAGCTCTGCTGCAGACGTCCTTCGTAGAATTGGTGAGGATGCAAGAATCATACAGGAATTTATTCAGCTCGGTGATAAGGCCAAAGTTGCTGCTTCAGAGGCCTTGGATGCTGAAGCTACTCTCGGAGAAATACCAGATGAATTCCTGGATCCAATTCAATATACTTTGATGAAGGATCCAGTTATCTTGCCTTCTTCAAAGACCACGGTTGATCGTCCTGTCATCCAGAGGCATCTTCTCAGTGATAGTACTGATCCATTCAACCGTTCTCATCTGACCGCCGATATGCTAATTCCTGATGTTGAACTCAAAGCAAGAATTGAAGAGTTTATCAGGTCTCAGGAAATGAAGAAACACAGTGAAAGCCTAAGTATGCAAAGTAATAAGGCCACCATTCAACCCACAAATGCTGATATGTTGATTGATTAG | 3192 | 0.417 | MATAKPQRTPQEVEDIIIRKIFHVTITGESTTTTGVTDSRIVYLELTAAEILSEGKDLLLSRDVMERVLIDRLSGDFPTAGAENSPFQYLLGCYNRAHDEGKKIVNMKDKNLRSEMETVVKQAKKLCVSYCRIHLANPELFASQNSNSGTGKSPLLPLIISECGGGGGMGVFGSGSDTGGVKSPPGFLDEFFRDPDFESLDRILKGLYEELRGNVVKISVLGNFQDSLRALLFLVRLPVGAKSLVSHEWWIPKGLYMNGRAIEMTSILGPFFHISALPDQTFFKSNPDIGQQCFSDASTRRPSDLLSSFTTIKNVMNTLYDGLSEVLRNLLRSTDTRENVLEYLAEVINLNASRAHIQVDPITCASSGMFVNLSAVMLRLCEPFLDANLTKRDKIDAKYVHHANRLKLSGLTALHASSEEVTEWLDSKNPAKEGEMIQCNDGEKRLKQSQEATSSGSNNASAKYSFICECFFMTARVLNLGLLKAFSDFKHLVQDISRSEDTLATLKNMQGQSPSPQLELDITRLEKELELYSQEKLCYEAQILRDNTFIQNALSFYRLMIVWLVGLVGGFKMPLPPTCPMEFSAMPEHFVEDAMELLIFASRIPKALDGVVLDEFMNFIIMFMGSPDFIKNPYLRAKMVEVLNNWMPRRSGSSATATLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWNVPSHRSAWRQVIHERHLNFLSLTILYCIQFLLNLILLQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWERRPVQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQITAPFLLPEMVDRVASMLNYFLLQLVGPQRKSLSLKDPEKYEFRPKHLLKQIVHVYVHLTRGDTNSIFPSAISKDGRSYNDQLFSSAADVLRRIGEDARIIQEFIQLGDKAKVAASEALDAEATLGEIPDEFLDPIQYTLMKDPVILPSSKTTVDRPVIQRHLLSDSTDPFNRSHLTADMLIPDVELKARIEEFIRSQEMKKHSESLSMQSNKATIQPTNADMLID* | 1064 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tpr2g0293 | 1063 | CDD | RING-Ubox_UBE4A | 967 | 1035 | - | - | |
| Tpr2g0293 | 1063 | ProSiteProfiles | U-box domain profile. | 964 | 1038 | IPR003613 | GO:0004842|GO:0016567 | |
| Tpr2g0293 | 1063 | Coils | Coil | 515 | 542 | - | - | |
| Tpr2g0293 | 1063 | Pfam | Ubiquitin elongating factor core | 268 | 948 | IPR019474 | GO:0000151|GO:0006511|GO:0016567|GO:0034450 | |
| Tpr2g0293 | 1063 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 964 | 1043 | IPR013083 | - | |
| Tpr2g0293 | 1063 | PANTHER | - | 1 | 738 | - | - | |
| Tpr2g0293 | 1063 | PANTHER | - | 747 | 1041 | - | - | |
| Tpr2g0293 | 1063 | PANTHER | UBIQUITINATION FACTOR E4 | 1 | 738 | IPR045132 | GO:0000151|GO:0030433|GO:0034450 | |
| Tpr2g0293 | 1063 | PANTHER | UBIQUITINATION FACTOR E4 | 747 | 1041 | IPR045132 | GO:0000151|GO:0030433|GO:0034450 | |
| Tpr2g0293 | 1063 | SUPERFAMILY | RING/U-box | 957 | 1036 | - | - |
Showing 1 to 10 of 12 entries
Functional genes information
Pathway information
Event-related genes