Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0274 ATGGATTTCAACACCCCAATACGATCCAACACCACGCCCCTCTCCAATCCAGTCTTCAAATCTAAACTCATTATCTTAAACGAATGGTGGCTCATGAAGCCTCAAAACCAGTGCAAGGGTTTAGCTCTTGCTGGCATTGCTTCAATGGAGAGAGAAAGAATGTTTCTATCTTCTGTGATTGTAAAGAGGCATGAACCCAATGTTGTAGAGACTGAAGATGGCATCACAATAATCTTCCGTGGTTTTATTAACTCCTCTCGTACATCTCAAAATGGATTTTCCTCTGATGTATGTCGCCGGTTCTTAGTTGGATTTCCACACAATTGGAAAAATTATTTTGTTCATTGTTCAGGAAATGAATGTCAATATGTGGATAAAGTTACCGGTTTTGATGACTCAAATGCTTCTTCCCACAAAAAAACAGCTGATGAGAATTCACAGGAAGTTATGGAAGCTGAAGATAATGGAAATATTGTGAGTATTAGGTTGCCTCAACCGCAGGTTGGCATGGTTGATAATGGTGAAAATGTAGTCTCAGATGTTAACGAATTACATGCTTCTTCCCACCTAAAAACAGCTGATGTGGCTTCCCACCTAAAAACAGCTGATGTGGCTTCGCATGAAGCTATGGAAGCCGAAGATAAAGACAATATTGCGAGTCTTAGGTTGTCTCAACCGCTGGTCAACGTGGGTTATAATGGTGAAAATAGAGTCTCAGATGTAGACGACTTGAATGCTTCTTTCCACAAAAACACAGCTCATGTGATTTCACATGAACCTATGGTAGCTGAAGCTAACGTCAATATCGGGAGTCTTAGGTTATCTCAACCGCAGGTTGATTTGATTAATAATGGTGAAAATGGAGTCTCAATTGTTGCAGCAGCTGAAAGTAGACAATCTTTGATGAGTGTGTTTGAATTTGATCCTATTCATGAGCAAAGCAATGTTAGGTCTCCACTTAACCCAAAGAAATTGGAATTTGAACAGTTATCAAGTGACCGCAAGGAGAAAAAACGTATCAAGAAGAAGATTGTAGAGGATACAAGTAGTTTGTGTAAAAAGGTGCTGACAAGAAGCATTGCCAAAAAAAGTCACATGATGCTTAAAAGGGTTGTGAAAGCTGAAGTAAAATGTTCTAGTAGTCCTGTTAGAAGATCTCCCAGGGTACTTAATTATGGAAAAAAAATTAGCTATTTGGATTTTTTTGAAGATTTGGATTTTTTTGAAGATATATAG 1236 0.3851 MDFNTPIRSNTTPLSNPVFKSKLIILNEWWLMKPQNQCKGLALAGIASMERERMFLSSVIVKRHEPNVVETEDGITIIFRGFINSSRTSQNGFSSDVCRRFLVGFPHNWKNYFVHCSGNECQYVDKVTGFDDSNASSHKKTADENSQEVMEAEDNGNIVSIRLPQPQVGMVDNGENVVSDVNELHASSHLKTADVASHLKTADVASHEAMEAEDKDNIASLRLSQPLVNVGYNGENRVSDVDDLNASFHKNTAHVISHEPMVAEANVNIGSLRLSQPQVDLINNGENGVSIVAAAESRQSLMSVFEFDPIHEQSNVRSPLNPKKLEFEQLSSDRKEKKRIKKKIVEDTSSLCKKVLTRSIAKKSHMMLKRVVKAEVKCSSSPVRRSPRVLNYGKKISYLDFFEDLDFFEDI* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0274 411 Pfam SANTA (SANT Associated) 24 112 IPR015216 -
Tpr2g0274 411 PANTHER TRANSCRIPTION REGULATOR OTHERS FAMILY-RELATED 9 195 - -
Tpr2g0274 411 PANTHER TRANSCRIPTION REGULATOR OTHERS FAMILY-RELATED 204 393 - -
Tpr2g0274 411 PANTHER MIS18-BINDING PROTEIN 1 204 393 IPR039110 -
Tpr2g0274 411 PANTHER MIS18-BINDING PROTEIN 1 9 195 IPR039110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0274 Tpr-Chr2 3441625 3447749 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr2g0274 SANTA 7.9e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0274 - - mtr:MTR_5g040080 438.728