Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0262 ATGAATTCTCCAACTACTTCCGATGCCGTTACGGCGGCGCAGTCTCTCTCCGACCACCGCGGAATCAGCATGTCAAATACTATTCACTCCGAAATCACCTCTTGCTTGCCGTTACCTTCGCTTCCGGTTTTCTGCGGAGCTTCCGATCAAGACCTACGACTCTTCGATTCACCGTTGCTGTTGAACCGCGTCGATATTCTCGCACAGTCTAGCAAGATCGCTGAGATGCTCCGAAACACTGATGTTTCATACTTGAATTTAAGAGATGATGCCAATGCTGTTCGGTATAACTATGTCGAGCCTTTAGAACTCCATGATGAAGTTCTTAGGTGTAATCCTGAAGCATTTGAATGCAGCACTGCAGGTAAACAGAGTCCTGTCAAGGAGAAGATCTCTGGTAGTGCATTACCTGAAAAGAAGCTCTCTGAATCAAGTTTTTCTGTCCCGAGTCAGACTCAAAAAGACTATAATGCAACCCATAGCCGACAGCTTGATAATTTTTCTACAAATGACATTTCTACATTGTCTTCTAAGAAATCAAAAGTTAAGAAGAAAGCCGGTAACGGATTATCTATTGCACCTGACCCTACTGAGCTTCAAGATGCCAGCATTGGAAGATTTCGTGAGTTTTTGGAGGACTTATGTAGCAAGGCTGAACGGAATAGTGGTGATCTAGATGAAGCAGTAGAATTGTTGTCATTGTCTCTTTCAGATCTTAGAACGCTTGTTAATGAAATAATGTCTATACGTGAGAAGAAACTTCTGCATTTGGTCCCTGTAGAATTCCTTGTTAGACTGCTAAAGGTTTTAGATCATCAGATACACATAGCAGAAGGCCTGTCAATTGAGGATTGTGACAATTCCAATTCAGAACAAGTTTCGTCTCTTTTTGCTGCGTTGGAATCCATTCATGCTGCACTGGCGGTGATGGCTCATACTGACATGCCAAAACAACTTTATAAAGAAGAGGTCATTGAGAGAATTCTGGAGTTTTCCAGGCATCAGATAACGGATGTGATGTGTGCATGTGATCCTTCATACCGGGCATTATACAGACCTAGTGAAAACACTGCACTTGAAGTTGATGATGAAGAATATGATGCTGAATTAGGCTCAGCAAGCAAAAAACGACGTACTAGCAGCAAGACTGTGAAGTTGAAGAAATCAGCATCAAGCAGGTTCTCTAGTGCTGTGAATGTTATTCTTCAGAAGTCGTGTACTGTTCTTGGACTACTCAAGGATTTGTTGTTAATAGAGAGGTTGTCAGATAGTTGCATTTTACAACTTGTAAAAACATGCATTTCAACGTTCTTGGTTGATAACATTCAGCTCTTGCAATTGAAGGCAATTGGTTTACTCAGTGTGATATTCTATTTATACACACAACATCGTACTTATGTGTTAGATGAAATGCTTCACCTTCTTTGGAAATTACCGCATTCAAAGCGAGCTTTAAGGAATTATCACATACGTGAGGAAGAGCAAAGACAGATCCAGATGATTACTGCTTTGTTGATCCAATTAATTCATTGTAGTGCTAACCTTCCTGATACTTTAAGACTAGCATCAAGTGGTAACTCTGTATTGGAAGTCTCGGTTGATGCTAGTTATCCAACTAAATGCCGTGACGCAGTAAGAGAGGCCTGCGGTCTATTTTGGAGCCGTGTAATTCATCGAGTTGCAAATGCAAAGACTCAGGATGCTTCTGAACTGAAGTCCATAATGGAGAATCTTGTTACTGATTTACTGACCACTCTAAATTTACCCGAGTATCCTGCTTCAGCTTCTATTCTAGAGGTTCTATGTGCTATACTAATTAATAATGCTGGGTCAAACTCCAAGGATTTCGCTGCACGTTCCATGGCAATTGATATTCTTGGCACTATTGCTGCAAGGTTGAAGCGTGATGCTGTGATTTGTAGCCGGGAAAAGTTCTGGGTACTTCAAGATTTACTTAGTGAGAATGCTGCTCGTCCTCATTATCCAAAAGATACATGTTGTATCTGTTTGGGTGGAAGGATTGAAAATTTGTTCATATGTTCCGGCTGCAATAGGCTTTTTCATGCTGACTGTTTGGACATTAAAGAAAATGAAGTTCCCAACCGGAACTGGTACTGTCATATCTGCATCTGCTCAAAGCAACTGCTTGTATTACAATCATATTGCAATTCCCAGCGCAAGGATGATGTAAAAAAGAATCGTAAAGTGTCAATGGATGATTCTGCATTTTCTAACCATGAAATTGTTCAACAATTGCTTTTGAATCACCTTCAAGATGTCACCTCTGATGATGACCTGCATATTTTCATTTGCTGGTTTTATCTATGCGTATGGTATAAAAATGATCCAAAATCTCAGCAGAAGCCCATTTACTACTTTGCTAGGATGAAATCAAGAACCATAATACGGGATTCTGGTACTGTTTCTTCTATGCTGACGCGAGATTCAATCAAGAAGATTACTCTAGCTTTAGGCCAAAAAAGTTCATTTAGTCGAGGCTTTGATAAGATTTTTCACACACTTTTGGTAAATTTGAAGGAGAACTCTCCAGTTATTAGGGCTAAAGCTTTACGAGCAGTTAGCATCATTGTAGAGGCTGATCCAGAGGTATTGGGTGATAAACAAGTTCAAACATCTGTTGAAGGTAGGTTCTGTGACAGTGCAATATCTGTTAGAGAAGCAGCATTGGAACTTGTTGGTAGGCATATTGCTTCGCATCCAGATGTGGGTTTTAAGTATTTTGAGAAGATTACAGAGAGAATCAAAGATACTGGAGTGAGTGTTCGAAAACGAGCCATAAAAATTATTCGAGATATGTGCAGCTCAAATGCCAACTTCTCGGAGTTTACAAGAGCCTGCACAGAGATAATTTCTCGTGTTATTGATGATGAATCCAGTATCCAGGATCTTGTTTGCAAAACATTTTATGAGTTCTGGTTTGAGGAGCCTTCTGCTTCACAAACTCAGATCTTTGGAGATGGTAGTACTGTTCCACTTGAGGTAGCTAAGAAAACAGAGCAAATTGTTGAAATGTTGAAGAGAATGCCCAATAATAAGCTTCTTGTAACTGTAATAAAGCGCAACTTGACACTTGATTTTTTACCACAATCTACAAAAGCAATTGGGGTCAACCCAGTGTCCCTTGTAACAGTTCGTAAGCGTTGTGAGTTGATTTGCAAATGCTTGCTGGAGAAGATATTGCAGGTGGAAGAAATGAACAGTAATGAGGGGGAAAAACTTGTGCTTCCGTATGTGCTAGTCTTGCATGCATTTTGTCTTGTGGACCCAACTCTATGTGCACCAGCTTCTAACCCTTCCCACCTTGTCATTACTTTGGAGCAATATCTGAAGACTCAGGTTGACAATAGCATGGTCGCACAATTACTTGAGAGTATAATATTTATAATTGATGCTGTGTTGCCATTGCTGAGTAATCAGTTAACTCTGGGTTTTGTGGAGGAACTTGAGCAAGATTTGACGCAGATGATTCGCCGACATTCTTTCTTGACAGTTGTCCATGCTTGTATCAAGTGCCTCTGCAGTATGAGTAAGATTGCTGGGAAGGGGGCTACTGCAGTCCAGCATCTTATTCAGGTCTTCTTCAAATGTTTGGAAGATACCCAGGCAGTTGTAAACAAGCAGCAAGTCGGGCGATCTCTCTTCTCTCTTGGTTTGCTTATTCGTTATGGCAACTGTTTGTTTGCCGGCTCTGGTAATGAACTTGTTGATGTCAAAAGGAGTCTCGGCTTGCTTATGAAGTATCTTGCTGTGGAGGATTGTACTCTTCAGGTTAGATCATTGCAGGCACTAGGATATGTTCTAATTGCAAGGCCTGAATATATGTTAGAAAATGACATTGGAAAGATACTGGAGGGAACATTGTCTAACATTGCTAATGAACGGATAAAGATGCAAGCATTACAAAACATGTTTGAGTATCTTCTTGATGCTGAAAGCAAAATGGAAACAGACAAAGTTGATGGTAATGTACCTGGTCACTTGGTCGGAGCTGGGCAGAGTGTACCTGTTGCTGCTGGTGCTGGGGATACAAACATATGCGGGGGTATAATTCAGTTGTACTGGGATAATATTTTGGGCAGATGTTTGGATTTGAACGAACAGGTTCGACAATCAGCCTTGAAGATTGTTGAAGTTGTGTTGCGCCAAGGTCTTGTTCATCCCATCACTTGTGTTCCACATCTTATAGCACTAGAAACAGATCCTCTGGAGCCAAATTCAAAGTTGGCTCATCATCTCCTAATGAATATGAATGAGAAGTACCCTGCATTTTTTGAAAGCCGATTGGGTGATGGACTTCAAATGTCTTTTATGTTCATGCAATCTATTTGTGTCAGTCCTAATGAAAATGTTAACCACAAGACCCAATCTAAGATCCATGTTTCTGGAAAAGGCAAGCCCCAGGCCGATTCGCTCACTCAATCAAGAGTTGGGGTTTCTCGAATATACAAGCTCATCCGAGGGAACCGGATATCAAGGAACAAATTTATGTCCTCAATTGTACGAAAATTTGATAATCCAAGATGGAACAAATTTGTAATATCTTTCTTAACGTACTGCACAGAGGTCCTTGCCTTGCTTCCATTCATTGCACCTGATGAACCACTTTATTTAATCTATGCTATCAATCGAGTAGTTCAGGTTAGGGCTGGTCCGCTGGAGGCGAACTTCAAAGCCTGGAGTTCAAGCTTGTCACGAAGTGAGGGTGATGGTACACCTCATGGGAATGGAATGTATCCACAGGCACCAGATGAGCCTATTCATACAACCCAAGTCCAGTCATTGGATTTAAATGGCACATATCAGCAAAATGTAGATGTTCGTCCCTACCTCAATGATATGACATCAGTGGATTTAAATGGAACAAATCACCAATTGCCAGATTATCCTTTATCACATAATGGTAGATCAAAAGTAAAGCTACATGCTGCAGGTTTTGCAGATGCCTTTACCTTCTCAAAAGATGATCTTGAGAAAGTTCAGGCTGACTGTTTATCCGCGATTGCATTGCAACTTCTTTTGAAGTTAAAGAGACACCTAAAAATCATGTATAGTCTCGATGATGCCAGATGTCAGGCTTATTCTCCAAGCGAACCACCAAAACCTGGAGATGTTTTTTCAAAACAGAATGTTCCATTTAATATTTGTGAATCTCAGTTCAGTTTGCCTACATGTCCGCAAGAATTAATACAAAGATATCAGGAGTTTAAGAATGCATTGAAGGAAGATACAGTGGATTATTCACTCTACACCGCAAATATAAAACGGAAGCGACAAACACCCAGAAAAATTCGGAAATCTGGACCTATGGTAGGTGCTAATATTGATGAGGATGACGATGAGGATTGGGCTGGTGGAATGCGCAATATAAATTTTAGTGGTGGCCGCAGGACTAGCCTTAGAAGCTCCAGACAATACTGA 5439 0.4069 MNSPTTSDAVTAAQSLSDHRGISMSNTIHSEITSCLPLPSLPVFCGASDQDLRLFDSPLLLNRVDILAQSSKIAEMLRNTDVSYLNLRDDANAVRYNYVEPLELHDEVLRCNPEAFECSTAGKQSPVKEKISGSALPEKKLSESSFSVPSQTQKDYNATHSRQLDNFSTNDISTLSSKKSKVKKKAGNGLSIAPDPTELQDASIGRFREFLEDLCSKAERNSGDLDEAVELLSLSLSDLRTLVNEIMSIREKKLLHLVPVEFLVRLLKVLDHQIHIAEGLSIEDCDNSNSEQVSSLFAALESIHAALAVMAHTDMPKQLYKEEVIERILEFSRHQITDVMCACDPSYRALYRPSENTALEVDDEEYDAELGSASKKRRTSSKTVKLKKSASSRFSSAVNVILQKSCTVLGLLKDLLLIERLSDSCILQLVKTCISTFLVDNIQLLQLKAIGLLSVIFYLYTQHRTYVLDEMLHLLWKLPHSKRALRNYHIREEEQRQIQMITALLIQLIHCSANLPDTLRLASSGNSVLEVSVDASYPTKCRDAVREACGLFWSRVIHRVANAKTQDASELKSIMENLVTDLLTTLNLPEYPASASILEVLCAILINNAGSNSKDFAARSMAIDILGTIAARLKRDAVICSREKFWVLQDLLSENAARPHYPKDTCCICLGGRIENLFICSGCNRLFHADCLDIKENEVPNRNWYCHICICSKQLLVLQSYCNSQRKDDVKKNRKVSMDDSAFSNHEIVQQLLLNHLQDVTSDDDLHIFICWFYLCVWYKNDPKSQQKPIYYFARMKSRTIIRDSGTVSSMLTRDSIKKITLALGQKSSFSRGFDKIFHTLLVNLKENSPVIRAKALRAVSIIVEADPEVLGDKQVQTSVEGRFCDSAISVREAALELVGRHIASHPDVGFKYFEKITERIKDTGVSVRKRAIKIIRDMCSSNANFSEFTRACTEIISRVIDDESSIQDLVCKTFYEFWFEEPSASQTQIFGDGSTVPLEVAKKTEQIVEMLKRMPNNKLLVTVIKRNLTLDFLPQSTKAIGVNPVSLVTVRKRCELICKCLLEKILQVEEMNSNEGEKLVLPYVLVLHAFCLVDPTLCAPASNPSHLVITLEQYLKTQVDNSMVAQLLESIIFIIDAVLPLLSNQLTLGFVEELEQDLTQMIRRHSFLTVVHACIKCLCSMSKIAGKGATAVQHLIQVFFKCLEDTQAVVNKQQVGRSLFSLGLLIRYGNCLFAGSGNELVDVKRSLGLLMKYLAVEDCTLQVRSLQALGYVLIARPEYMLENDIGKILEGTLSNIANERIKMQALQNMFEYLLDAESKMETDKVDGNVPGHLVGAGQSVPVAAGAGDTNICGGIIQLYWDNILGRCLDLNEQVRQSALKIVEVVLRQGLVHPITCVPHLIALETDPLEPNSKLAHHLLMNMNEKYPAFFESRLGDGLQMSFMFMQSICVSPNENVNHKTQSKIHVSGKGKPQADSLTQSRVGVSRIYKLIRGNRISRNKFMSSIVRKFDNPRWNKFVISFLTYCTEVLALLPFIAPDEPLYLIYAINRVVQVRAGPLEANFKAWSSSLSRSEGDGTPHGNGMYPQAPDEPIHTTQVQSLDLNGTYQQNVDVRPYLNDMTSVDLNGTNHQLPDYPLSHNGRSKVKLHAAGFADAFTFSKDDLEKVQADCLSAIALQLLLKLKRHLKIMYSLDDARCQAYSPSEPPKPGDVFSKQNVPFNICESQFSLPTCPQELIQRYQEFKNALKEDTVDYSLYTANIKRKRQTPRKIRKSGPMVGANIDEDDDEDWAGGMRNINFSGGRRTSLRSSRQY* 1813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0262 1812 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 650 720 IPR013083 -
Tpr2g0262 1812 SUPERFAMILY ARM repeat 242 977 IPR016024 -
Tpr2g0262 1812 CDD PHD_SF 665 709 - -
Tpr2g0262 1812 SMART PHD_3 665 710 IPR001965 -
Tpr2g0262 1812 Pfam Sister chromatid cohesion C-terminus 1353 1551 IPR024986 -
Tpr2g0262 1812 PANTHER EXPRESSED PROTEIN-RELATED 20 1810 - -
Tpr2g0262 1812 ProSiteProfiles Zinc finger PHD-type profile. 663 712 IPR019787 -
Tpr2g0262 1812 SUPERFAMILY FYVE/PHD zinc finger 663 717 IPR011011 -
Tpr2g0262 1812 Gene3D - 836 1312 IPR011989 -
Tpr2g0262 1812 SUPERFAMILY ARM repeat 809 1432 IPR016024 -
Tpr2g0262 1812 MobiDBLite consensus disorder prediction 138 169 - -
Tpr2g0262 1812 Pfam HEAT repeat associated with sister chromatid cohesion 858 899 IPR026003 -
Tpr2g0262 1812 PANTHER NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED 20 1810 IPR033031 GO:0003682|GO:0010468|GO:0061780
Tpr2g0262 1812 MobiDBLite consensus disorder prediction 127 169 - -
Tpr2g0262 1812 ProSitePatterns Zinc finger PHD-type signature. 666 709 IPR019786 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0262 664 711 PHD Transcription Factor Family AT5G36670 47.917 2.80e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0262 K06672 - gmx:100792021 2722.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0262 2 3326719 3339523 Tpr2g0262 2 3326719 3339523 ECH