Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr2g0258 | ATGTTTTCTTCTATCAAATTTATTTCCTTTACTCAATTCAACTTCATCATCTTTTTCTTCTCCATTTTTCTCTTCTTAGCTTCTCAATACGACGCCGTTTCACTCTATTCCGATAAATTAACACTTCTCCGTCTCAAAAACTCACTCTCCGACCCCACCGGAGTTCTCTCTTCATGGAGCCCTTCCTCCGGCCACTGTTCCTGGTATGGTGTTCACTGTGATTCAAGCTCCCGTGTCGTTGCTCTCAACATCACCGGTGCCGGAGATGGTAACCGGAGTTCACACCCATGTTCTGATTTTGGTATGTTTCCGCTTTATGGATTTGGAATTAGGAGAAGCTGTTTGGGTTTTAAGGGTTCTTTGTTTGGAAAGTTTCCATCTTTGATCAGTGAGTTAACTGAGCTTAGGGTTTTGTCTTTACCTTTCAATGGGTTGGTGGGTTCAATTCCTCAAGAGATTTGGAGTATGGAGAAACTTGAAGTTCTTGATTTAGAAGGTAATTTCATTAGTGGTTATTTGCCTTTTCATTTTCAAGGTTTGAGAAAATTAAGGGTTTTGAATTTGGGGTTTAATAAGATTGTTGGAGTTGTACCTAGTGTTTTATCTTCTCTTGAGAATTTAGAGGTTTTGAATTTAGCTTCAAATGATTTGAATGGTTCTGTTCCTGGTTTTGTTGGGAAGTTTAGAGGGGTGTATTTGTCTTTTAATCAATTTAGTGGAGTTATTCCTGAGGAGATTGGTGAGAATTGTGGGAAGCTTGAGCATTTGGATTTGTCTGGTAACTCTTTGGTTGAAGAGATTCCGAAGAGTTTGGGGAATTGTATTGGGTTGAGGACACTTTTGTTGTATTCAAATTTGTTGGAAGAGGGTATTCCTGCTGAATTTGGGAACCTTAAGAGTCTTGAGGTGTTGGATGTTTCGAGGAATACACTTAGTGGTTCTATTCCTCACGAGCTTGGAAATTGTAAAGAGCTTTCTGTTGTTGTGCTTTCTAACCTTTTCGATCCGGTTGGGGATGTTGGGTTTGTTACTTTGAATGATGAGTTGAATTATTTTGAAGGTTCAATGCCCGAGGAAGTTGTTTCCCTTCCTAAGCTTACGATTTTGTGGGCTCCCATGGTGAATTTGGAAGGAAGTTTTCCTAGGAGTTGGGGTGCTTGTGGTAATTTGGAGATGGTTAATTTGGCTCAGAATTTCTTCACCGGAGAGTTTCCAAACCAGCTTGGTTTCTGCAAGAAGCTGCATTTTCTTGATCTAAGCTCAAACAATCTTACTGGGCAGCTTTCTGAGGAACTTCATGTTCCATGTATGACTGTGTTTGATGTTAGTGTGAACAAGTTATCTGGTTCAGTTCCAGATTTCTCCAACAATGGTTGTTCTCCCTTTCCTTTATGGAATGGGAACCAGTTTAACACCGATGATGTTATGACTCCTTATGCATCATATTTCTCATCAAAAGTTCGTGAGAGAACACTTTTCACATCATTAGGGGGAGTTGGCCTTTCAGTCTTTCACAGCTTTGAGCAAAACAACTTCACTGGCATTCAGTCACTGCCAATAGCACGTGAGAGGATGGAGGAAAAGAGTGGTTACACACTTCTTGTCGGAGAGAACAAGCTCACGGGACCGTTTCCTACATATTTGTTTCAGAAATGTGATGGATTAGATGCATTGCTTTTGAATGTGAGTTATAATATGCTATCTGGTGAGATTCCTTCAAATATTAGTAGAATCTGCAGATCACTGAAATTTTTGGATGCATCTGGAAATCAAATTTCAGGACCAATTCCCTCTACTTTAGGGGATTCGGTTTCTCTTGTTTCCCTGAATCTCAGTAGCAACCGGTTACAAGGTCAGATTCCCACCCGCCTCGGACAGATGAATCATCTGAAGTTTCTTTCTTTGGCCGATAATCACTTGAGCGGTTCAATTCCTACCGGCCTAGGAAATTTGTACTCTTTACAAGTCTTGGACCTTTCTGCAAACTCTCTTACTGGTGAGATTCCAAATTTTATTGAGAACATGAGAAATCTGACTGATGTTTTGCTAAATAACAACAACCTTTCTGGACACATTCCTGCTGGTTTGGCAAATGTCACGACACTCTCTGTATTCAACGTGTCTTTCAATAACTTATCTGGATACTTGCCGTCAAATAGTAGCCTGATCAAATGCAGCAGTGCTGTTGGTAATCCATTTCTAAGTTCCTGCCGCGGAGTTTATTTAACTGTGCCATCGGCAAATCAACAAGGGCAGTTTGATGACAATTCTTCTGAAACTGCACCAGCTACTGGAAAAACTGATAACGGTTTCAGCGCTATTGAAATAGCATCTATAACTTCTGCTACTGCCATTGTTTCAGTTCTTATAGCTCTCATTGTTCTGTTCTTCTTCACGCGAAGGTGGAAACCGAAATCCAGGGTTGGTGGTTCTGCCAAAAGAGAAGTTACCGTGTTTACTGATATCGGCATTCCATTGACATTTGAAAATGTTGTCCAAGCCACAGGAAATTTCAATGCAAGCAACTGTATTGGGAGTGGAGGATTCGGCGCAACTTATAAGGCAGAGATATCACAGGGAATCTTGGTTGCAGTGAAACGTCTTTCAGTTGGACGTTTCCAAGGTGTTCAACAATTCCATGCAGAGATTAAGACACTTGGAAGGCTTCATCATCCAAATCTTGTAACTTTGATTGGCTACCATGCTAGTGAGACAGAGATGTTTCTCATATACAATTATCTTCCAAGTGGTAATCTTGAAAAGTTCATCCAAGAGAGATCCACAAGGGCTATGGATTGGAAAATTCTTCACAAGATTGCATTAGACATAGCGCGCGCACTTTCCTATCTGCACGATCAATGTGTACCGCGTGTTCTTCATCGTGATGTCAAACCTAGCAATATCTTGTTGGACGACGATTTCAACGCTTATCTATCCGACTTTGGACTGGCGAGACTTCTCGGAACTTCAGAGACACACGCCACAACTGGTGTGGCGGGAACGTTTGGGTACGTTGCTCCTGAATATGCCATGACGTGTCGTGTTTCTGATAAAGCTGATGTGTATAGCTATGGTGTGGTGCTTCTTGAGTTGCTATCAGATAAAAAATTATTGGACCCTTCATTTTCTTCTTATGGAAATGGTTTCAATATAGTAGCATGGGGATGCATGCTATTGAGGGAAGGAAGAGCAAAGGAGTTTTTCGCTGCAGGTTTATGGGACGCCGGACCAGAAAATGATTTGGTAGAGGTTCTTCACTTAGCAGTTGTTTGTACTGTTGACTCACTATCAACAAGACCTACAATGAAACAGGTTGTGAAAAGGCTTAAGCAACTTCAACCTCCATCATGCTAA | 3354 | 0.4112 | MFSSIKFISFTQFNFIIFFFSIFLFLASQYDAVSLYSDKLTLLRLKNSLSDPTGVLSSWSPSSGHCSWYGVHCDSSSRVVALNITGAGDGNRSSHPCSDFGMFPLYGFGIRRSCLGFKGSLFGKFPSLISELTELRVLSLPFNGLVGSIPQEIWSMEKLEVLDLEGNFISGYLPFHFQGLRKLRVLNLGFNKIVGVVPSVLSSLENLEVLNLASNDLNGSVPGFVGKFRGVYLSFNQFSGVIPEEIGENCGKLEHLDLSGNSLVEEIPKSLGNCIGLRTLLLYSNLLEEGIPAEFGNLKSLEVLDVSRNTLSGSIPHELGNCKELSVVVLSNLFDPVGDVGFVTLNDELNYFEGSMPEEVVSLPKLTILWAPMVNLEGSFPRSWGACGNLEMVNLAQNFFTGEFPNQLGFCKKLHFLDLSSNNLTGQLSEELHVPCMTVFDVSVNKLSGSVPDFSNNGCSPFPLWNGNQFNTDDVMTPYASYFSSKVRERTLFTSLGGVGLSVFHSFEQNNFTGIQSLPIARERMEEKSGYTLLVGENKLTGPFPTYLFQKCDGLDALLLNVSYNMLSGEIPSNISRICRSLKFLDASGNQISGPIPSTLGDSVSLVSLNLSSNRLQGQIPTRLGQMNHLKFLSLADNHLSGSIPTGLGNLYSLQVLDLSANSLTGEIPNFIENMRNLTDVLLNNNNLSGHIPAGLANVTTLSVFNVSFNNLSGYLPSNSSLIKCSSAVGNPFLSSCRGVYLTVPSANQQGQFDDNSSETAPATGKTDNGFSAIEIASITSATAIVSVLIALIVLFFFTRRWKPKSRVGGSAKREVTVFTDIGIPLTFENVVQATGNFNASNCIGSGGFGATYKAEISQGILVAVKRLSVGRFQGVQQFHAEIKTLGRLHHPNLVTLIGYHASETEMFLIYNYLPSGNLEKFIQERSTRAMDWKILHKIALDIARALSYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKLLDPSFSSYGNGFNIVAWGCMLLREGRAKEFFAAGLWDAGPENDLVEVLHLAVVCTVDSLSTRPTMKQVVKRLKQLQPPSC* | 1118 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr2g0258 | 1117 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 | 15 | 1116 | - | - | |
Tpr2g0258 | 1117 | PRINTS | Leucine-rich repeat signature | 414 | 427 | - | - | |
Tpr2g0258 | 1117 | PRINTS | Leucine-rich repeat signature | 651 | 664 | - | - | |
Tpr2g0258 | 1117 | Gene3D | Phosphorylase Kinase; domain 1 | 802 | 913 | - | - | |
Tpr2g0258 | 1117 | Pfam | Leucine rich repeat N-terminal domain | 37 | 74 | IPR013210 | - | |
Tpr2g0258 | 1117 | Gene3D | Ribonuclease Inhibitor | 34 | 228 | IPR032675 | - | |
Tpr2g0258 | 1117 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED | 15 | 1116 | - | - | |
Tpr2g0258 | 1117 | ProSiteProfiles | Protein kinase domain profile. | 838 | 1112 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr2g0258 | 1117 | Pfam | Leucine rich repeat | 158 | 217 | IPR001611 | GO:0005515 | |
Tpr2g0258 | 1117 | SUPERFAMILY | L domain-like | 532 | 738 | - | - | |
Tpr2g0258 | 1117 | SUPERFAMILY | Protein kinase-like (PK-like) | 820 | 1109 | IPR011009 | - | |
Tpr2g0258 | 1117 | Pfam | Leucine Rich Repeat | 252 | 274 | IPR001611 | GO:0005515 | |
Tpr2g0258 | 1117 | Pfam | Leucine Rich Repeat | 653 | 674 | IPR001611 | GO:0005515 | |
Tpr2g0258 | 1117 | Gene3D | Transferase(Phosphotransferase) domain 1 | 914 | 1114 | - | - | |
Tpr2g0258 | 1117 | SMART | LRR_typ_2 | 204 | 226 | IPR003591 | - | |
Tpr2g0258 | 1117 | SMART | LRR_typ_2 | 298 | 322 | IPR003591 | - | |
Tpr2g0258 | 1117 | SMART | LRR_typ_2 | 627 | 651 | IPR003591 | - | |
Tpr2g0258 | 1117 | SMART | LRR_typ_2 | 250 | 274 | IPR003591 | - | |
Tpr2g0258 | 1117 | SMART | LRR_typ_2 | 180 | 203 | IPR003591 | - | |
Tpr2g0258 | 1117 | SMART | LRR_typ_2 | 156 | 179 | IPR003591 | - | |
Tpr2g0258 | 1117 | SMART | LRR_typ_2 | 675 | 698 | IPR003591 | - | |
Tpr2g0258 | 1117 | Pfam | Protein kinase domain | 841 | 1039 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr2g0258 | 1117 | ProSitePatterns | Protein kinases ATP-binding region signature. | 844 | 866 | IPR017441 | GO:0005524 | |
Tpr2g0258 | 1117 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 958 | 970 | IPR008271 | GO:0004672|GO:0006468 | |
Tpr2g0258 | 1117 | CDD | STKc_IRAK | 844 | 1112 | - | - | |
Tpr2g0258 | 1117 | Gene3D | Ribonuclease Inhibitor | 501 | 749 | IPR032675 | - | |
Tpr2g0258 | 1117 | Gene3D | Ribonuclease Inhibitor | 229 | 334 | IPR032675 | - | |
Tpr2g0258 | 1117 | Gene3D | Ribonuclease Inhibitor | 342 | 477 | IPR032675 | - | |
Tpr2g0258 | 1117 | SUPERFAMILY | RNI-like | 123 | 450 | - | - | |
Tpr2g0258 | 1117 | SMART | serkin_6 | 838 | 1116 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr2g0258 | Tpr-Chr2 | 3275750 | 3279749 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr2g0258 | 16 | 1117 | Receptor kinase-like Gene Family | AT3G02130 | 62.643 | 0.0 | 1339 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XV | Tpr2g0258 | Pkinase | 8.5e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr2g0258 | - | - | gmx:100819882 | 1666.74 |