Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0254 ATGTTTTCAACTTCAATTATTATCAAATGGAGTTCCTTTACTCAATTCAACTTCATCTTCTTCTCCATTTTTCTCTTCTTAGCCTCTCAATACGACGCCGTTTCACCCAATTCCGACAAATCAACACTTCTCCGTCTCAAAAACTCCCTCTCCGACCCCGCCGGAGTTCTCTCTTCATGGAGCCCTTCCTCCGGCCACTGTTCCTGGTACGGTGTTCACTGTGATTCAAACTCCCGCGTTGTTGCTCTCAACATCACCGGTGCCGGAGATGGTAACCGGAGTTCACATCCGTGTTCTGATTTTGGTGTGTTTCCGCTTTATGGATTTGGAATTAGGAGAAGCTGTTTGGGTTTTAAGGGTTCTTTGTTTGGAAAGTTTCCATCTTTGATCAGTGAGTTAACTGAGCTTAGAGTTTTGTCTTTACCTTTCAATGGGTTGGAGGGTTCAATTCCTCAAGAGATTTGGAGTATGGAGAAACTTGAAGTTCTTGATTTAGAAGGTAATTTCATTAGTGGTTATTTACCTTTTAAATTTCAAGGTTTGAGAAAAATGAGGGTTTTGAATTTGGGGTTTAATAAGATTGTTGGAGTTGTACCTAGTGTTTTATCTTCTCTTGAGAGTTTGGAGGTTTTGAATTTAGCTTCAAATGATTTGAATGGTTCTGTTCCTGGTTTTGTTGGGAAGTTTAGAAGGGTGTATTTGTCTTTTAATCAATTTAGTGGAGTTATTCCTGAGGAGATTGGTGAGAATTGTGGGAAGCTTGAGCATTTGGATTTGTCTGGTAACTCTTTGGCTGAACGGATTCCAAAGAGTTTGGGGAATTGTGTTGGGTTGAGGACACTTTTATTGTATTCAAATTTGTTGGAAGAGGGTATTCCTGCTGAATTTGGGAACCTTAAGAGCCTTGAGGTGTTGGATGTTTCGAGGAATACACTTGATGGTTCTATTCCTCGTCAGCTTGGGAATTGTAAAGAGCTTTCTGTTGTTGTGCTTTCCAACCTTTTTGATCCGGTTGGGGATGATGGGTTTGTTAGTTTGAACGATGAGTTGAATTATTTTGAAGGTTCAATGCCTGAAGAAGTTGTGTCCCTTCCTAAGCTTACAATTTTGTGGGCTCCCATGGTGAATTTGGAGGGAAGTTTTCCTAGGAGTTGGGGTGCTTGTGCTAACTTGGAGATGGTCAATTTGGCTCTAAACTTTTTCACTGGAGAGTTCCCAAACTGGCTTGGCTTATGCAAGAAGCTTCATTTTATTGATCTGAGCTCAAACAATCTTACTGGGGAGCTTTCTGAGGAACTTCATGTTCCCTGTATGACTGTGTTTGATGTTAGTGCTAACATGTTGTCTGGTTCAGTTCCTAATTTCTCCAATAATGCTTGTTCTCCCTTTCCTCTATGGAACGAGAATCTGTTTGAAACTGACGACACTGCATCTCACTATGCGTCATATTTTTCATCGAAAGCTCGTGAGGGAACCCTTTTTGCATCACTAGGAGAAGTCGGTCTTTCAGTTTTTCACAACTTTGGGCAAAACAACTTCACTGGCATTCAGTCATTACCAATAGCCCATGACAGGATGGAGGAAAAAAGTAGTTACACACTTCTTGTCGGAGAGAACAAGCTAACGGGACTATTTCCTACATATTTATTTGAGAAATGTGACGGATTAGATGCATTGCTTTTGAATGTCAGTTACAATAGCTTTTCCGGTGATATTCCTTCTAATATTGGTAGAATGTGCAAATCTCTGAAATTTTTGGATGCATCTGGTAATCAAATTTCAGGACCAATTCCCCTTGGTTTAGGGGATTCGGTCTCTCTTGTTTCCCTGAACTTCAGTGGAAACCGGTTACAAGGTCATATTCCCACCAGCCTCGGACAGATGAAGGATCTGAAGTTTCTTTCTTTGGCTGGTAATAATTTGAGTGGCTTAATTCCTTCCGATATGGGGCAGCTGTACTCTTTACAGGTCTTGGATCTTTCTAGAAACTCTCTTACTGGGGAGATTCCAAAGTTTATCGAGAACATGAGAAATTTGACCAATGTTTTGCTCAATAACAACAACCTTTCTGGACACATTCCTGCTGGTTTGGCAAATGTCACGTCGCTCTCTGCATTCAACGTGTCTTTCAATAACTTATCTGGATACTTGCCATCAAATAGTAGCCTCATCAAATGCAGCAGTGCTGTTGGGAATCCGTTTCTAAGTTCCTGCCGTGGAGTTTCTCTGACTGTGCCATCAGCAAATCTACAAGGGCAGATTGATGAAAATTCTCCTATTACATCACAAGCTACTGAAAAAAATAGTGATAACGGTTTCAATGCCATTGAAATAGCATCTATAACTTCTGCTTCAGCCATTGTTTCGGTTCTTATAGCCCTTATTGTTCTGTTTTTCATAACGCGAAAGTGGAAGCCGAGGTCGAGGGTTGGTGGTTCCATTAAAAGAGAAGTTACTGTTTTTACTGATATTGGTGTCCCGTTGACATTTGAAAATGTTGTCCAAGCCACAGCAAATTTCAATGCAAGCAACTGTATAGGGAGTGGAGGGTTCGGCACAACTTATAAGGCAGAGATATCACAAGGAATCTTGGTTGCAGTGAAACGTCTTTCAGTTGGACGTTTCCAAGGTGTTCAACAATTCCATGCAGAGATTAAGACACTTGGAAGGCTTCATCATCCAAACCTTGTAACTTTGATTGGCTACCATGCTAGTGAGGCAGAGATGTTTCTCATATACAATTATCTTCCATATGGTAATCTTGAAAAGTTCATCCAAGAGAGATCCACCAGGGCTATGGATTGGAAAATTCTTCACAAGATTGCATTAGACATAGCGCGCGCACTTTCCTATCTGCACGATCAATGTGTACCGCGTGTTCTTCATCGCGATGTCAAACCTAGCAATATCTTGTTGGACGACGATTTCACCGCTTATCTATCCGACTTTGGACTGGCGAGACTTCTCGGAACTTCAGAGACACACGCCACAACCGGTGTGGCAGGAACGTTTGGGTACGTTGCTCCTGAATACGCCATGACATGTCGTGTTTCCGATAAAGCTGATGTGTATAGCTATGGTGTGGTGCTTCTTGAGTTGCTATCAGATAAAAAATTATTGGACCCTTCATTTTCTTCTTATGGAAATGGTTTCAATATAGTAGCATGGGGATGCATGCTACTGGGGCAAGGAAGGGCAAAGGAGTTTTTTGCTACTGGTTTATGGGATGCCGGACCCGAAAATGACTTGGTAGAGGTTCTTCACTTAGCAGTTGTGTGTACTGTTGATTCATTATCAACTAGACCTACAATGAAACAGGTTGTGAAAAGGCTTAAGCAACTTCAACCCCCATCATACTAG 3360 0.4149 MFSTSIIIKWSSFTQFNFIFFSIFLFLASQYDAVSPNSDKSTLLRLKNSLSDPAGVLSSWSPSSGHCSWYGVHCDSNSRVVALNITGAGDGNRSSHPCSDFGVFPLYGFGIRRSCLGFKGSLFGKFPSLISELTELRVLSLPFNGLEGSIPQEIWSMEKLEVLDLEGNFISGYLPFKFQGLRKMRVLNLGFNKIVGVVPSVLSSLESLEVLNLASNDLNGSVPGFVGKFRRVYLSFNQFSGVIPEEIGENCGKLEHLDLSGNSLAERIPKSLGNCVGLRTLLLYSNLLEEGIPAEFGNLKSLEVLDVSRNTLDGSIPRQLGNCKELSVVVLSNLFDPVGDDGFVSLNDELNYFEGSMPEEVVSLPKLTILWAPMVNLEGSFPRSWGACANLEMVNLALNFFTGEFPNWLGLCKKLHFIDLSSNNLTGELSEELHVPCMTVFDVSANMLSGSVPNFSNNACSPFPLWNENLFETDDTASHYASYFSSKAREGTLFASLGEVGLSVFHNFGQNNFTGIQSLPIAHDRMEEKSSYTLLVGENKLTGLFPTYLFEKCDGLDALLLNVSYNSFSGDIPSNIGRMCKSLKFLDASGNQISGPIPLGLGDSVSLVSLNFSGNRLQGHIPTSLGQMKDLKFLSLAGNNLSGLIPSDMGQLYSLQVLDLSRNSLTGEIPKFIENMRNLTNVLLNNNNLSGHIPAGLANVTSLSAFNVSFNNLSGYLPSNSSLIKCSSAVGNPFLSSCRGVSLTVPSANLQGQIDENSPITSQATEKNSDNGFNAIEIASITSASAIVSVLIALIVLFFITRKWKPRSRVGGSIKREVTVFTDIGVPLTFENVVQATANFNASNCIGSGGFGTTYKAEISQGILVAVKRLSVGRFQGVQQFHAEIKTLGRLHHPNLVTLIGYHASEAEMFLIYNYLPYGNLEKFIQERSTRAMDWKILHKIALDIARALSYLHDQCVPRVLHRDVKPSNILLDDDFTAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKLLDPSFSSYGNGFNIVAWGCMLLGQGRAKEFFATGLWDAGPENDLVEVLHLAVVCTVDSLSTRPTMKQVVKRLKQLQPPSY* 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0254 1119 SMART serkin_6 840 1118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g0254 1119 Gene3D Ribonuclease Inhibitor 230 335 IPR032675 -
Tpr2g0254 1119 SMART LRR_typ_2 181 204 IPR003591 -
Tpr2g0254 1119 SMART LRR_typ_2 652 675 IPR003591 -
Tpr2g0254 1119 SMART LRR_typ_2 676 699 IPR003591 -
Tpr2g0254 1119 SMART LRR_typ_2 157 180 IPR003591 -
Tpr2g0254 1119 SMART LRR_typ_2 299 323 IPR003591 -
Tpr2g0254 1119 SMART LRR_typ_2 251 275 IPR003591 -
Tpr2g0254 1119 SMART LRR_typ_2 205 227 IPR003591 -
Tpr2g0254 1119 CDD STKc_IRAK 846 1114 - -
Tpr2g0254 1119 ProSitePatterns Protein kinases ATP-binding region signature. 846 868 IPR017441 GO:0005524
Tpr2g0254 1119 Gene3D Phosphorylase Kinase; domain 1 804 915 - -
Tpr2g0254 1119 Pfam Protein kinase domain 843 1041 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g0254 1119 SUPERFAMILY RNI-like 124 461 - -
Tpr2g0254 1119 SUPERFAMILY Protein kinase-like (PK-like) 823 1111 IPR011009 -
Tpr2g0254 1119 Pfam Leucine rich repeat 606 665 IPR001611 GO:0005515
Tpr2g0254 1119 Pfam Leucine rich repeat 178 218 IPR001611 GO:0005515
Tpr2g0254 1119 SUPERFAMILY L domain-like 533 720 - -
Tpr2g0254 1119 ProSitePatterns Serine/Threonine protein kinases active-site signature. 960 972 IPR008271 GO:0004672|GO:0006468
Tpr2g0254 1119 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 17 1118 - -
Tpr2g0254 1119 Gene3D Ribonuclease Inhibitor 36 229 IPR032675 -
Tpr2g0254 1119 Pfam Leucine rich repeat N-terminal domain 36 75 IPR013210 -
Tpr2g0254 1119 Gene3D Ribonuclease Inhibitor 529 743 IPR032675 -
Tpr2g0254 1119 Gene3D Ribonuclease Inhibitor 343 528 IPR032675 -
Tpr2g0254 1119 Gene3D Transferase(Phosphotransferase) domain 1 916 1116 - -
Tpr2g0254 1119 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 17 1118 - -
Tpr2g0254 1119 ProSiteProfiles Protein kinase domain profile. 840 1114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g0254 1119 Pfam Leucine Rich Repeat 253 275 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0254 Tpr-Chr2 3260710 3265185 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0254 33 1118 Receptor kinase-like Gene Family AT3G02130 63.295 0.0 1333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Tpr2g0254 Pkinase 1.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0254 - - gmx:100819882 1630.15